Pinned Repositories
circlize
Circular visualization in R
ascat
ASCAT copy number R package
CINSignatureQuantification
Quantifying copy number signatures from absolute copy number profiles
ctree
Clone trees for Cancer Evolution studies from bulk sequencing data.
MToolBox
A bioinformatics pipeline to analyze mtDNA from NGS data
RMarkdown-Shiny
SmithWaterman
spice_downloads
Shiny app to simplify the download of manifests and metadata files from GDC (https://portal.gdc.cancer.gov/)
survminer
Survival Analysis and Visualization
VIBER
VIBER - Variational Binomial Mixtures
l0ka's Repositories
l0ka/RMarkdown-Shiny
l0ka/ascat
ASCAT copy number R package
l0ka/CINSignatureQuantification
Quantifying copy number signatures from absolute copy number profiles
l0ka/ctree
Clone trees for Cancer Evolution studies from bulk sequencing data.
l0ka/MToolBox
A bioinformatics pipeline to analyze mtDNA from NGS data
l0ka/SmithWaterman
l0ka/spice_downloads
Shiny app to simplify the download of manifests and metadata files from GDC (https://portal.gdc.cancer.gov/)
l0ka/survminer
Survival Analysis and Visualization
l0ka/VIBER
VIBER - Variational Binomial Mixtures