Pinned Repositories
ASMC
ASMC is a precision tool for deciphering the amino acid diversity that composes the active site of a given homologous protein family.
asmc_2016
ASMC code from de Melo-Minardi et al. (2010) [doi: 10.1093/bioinformatics/btq595], updated in 2016.
bioconda-recipes
Conda recipes for the bioconda channel.
microscope-user-doc
MicroScope Platform User Documentation
netsyn
NetSyn is a tool to detect conserved genomic contexts (i.e. synteny conservation) among a list of protein targets.
PanGBank-test-datasets
Test data to be used for automated testing with the pangbank pipeline.
pangenomeNEM
PlaScope
:microscope: :o: Plasmid exploration of bacterial genomes
PPanGGOLiN
Build a partitioned pangenome graph from microbial genomes
tenacity
Retrying library for Python
labgem's Repositories
labgem/PPanGGOLiN
Build a partitioned pangenome graph from microbial genomes
labgem/PlaScope
:microscope: :o: Plasmid exploration of bacterial genomes
labgem/netsyn
NetSyn is a tool to detect conserved genomic contexts (i.e. synteny conservation) among a list of protein targets.
labgem/ASMC
ASMC is a precision tool for deciphering the amino acid diversity that composes the active site of a given homologous protein family.
labgem/pangenomeNEM
labgem/microscope-user-doc
MicroScope Platform User Documentation
labgem/tenacity
Retrying library for Python
labgem/asmc_2016
ASMC code from de Melo-Minardi et al. (2010) [doi: 10.1093/bioinformatics/btq595], updated in 2016.
labgem/bioconda-recipes
Conda recipes for the bioconda channel.
labgem/PanGBank-test-datasets
Test data to be used for automated testing with the pangbank pipeline.
labgem/phigaro
Phigaro is a scalable command-line tool for predicting phages and prophages
labgem/CAESAR