laurabenestan

Admixture

Crossvalidation

Assignment

Bayescan

Using Bayescan program and visualizing results

BLAST

BLAST-finding candidate genes

DAPC

Discriminant Analysis in Principal Components (DAPC)

db-RDA-and-db-MEM

Seascape genomics using distance-based Redundancy Analysis and distance-based Moran's Eigenvector Maps

Genetic_differentiation_FST

Calculate Weir and Cockram FST using assigner program

Lobster-assigner

Assigner tutorial for Benestan et al. erratum

Moran-Eigenvector-Maps-MEMs

Investigating the partitionning of the spatial distribution across samples

RDA_outlier

Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putative genomic signal under divergent selection

laurabenestan/db-RDA-and-db-MEM

Seascape genomics using distance-based Redundancy Analysis and distance-based Moran's Eigenvector Maps

laurabenestan/RDA_outlier

Redundancy Analysis allowing to both estimate the percent of genomic variation explained by each variable as well as to detect the putative genomic signal under divergent selection

laurabenestan/Admixture

Crossvalidation

laurabenestan/Bayescan

Using Bayescan program and visualizing results

laurabenestan/DAPC

Discriminant Analysis in Principal Components (DAPC)

laurabenestan/Moran-Eigenvector-Maps-MEMs

Investigating the partitionning of the spatial distribution across samples

laurabenestan/Lobster-assigner

Assigner tutorial for Benestan et al. erratum

laurabenestan/Assignment

laurabenestan/BLAST

BLAST-finding candidate genes

laurabenestan/Genetic_differentiation_FST

Calculate Weir and Cockram FST using assigner program

laurabenestan/Pcadapt

Using PCAadapt in R

laurabenestan/Seascape_reservebenefit

Estimating genetic diversity and its link to environmental parameters

laurabenestan/assignment-panel

Assignment using ML and validation of the SNP sets

laurabenestan/Finescale_ibd

Code for the paper "Restricted dispersal in a sea of gene flow"

laurabenestan/GCTA

GCTA tutorial

laurabenestan/Gitub

Set-up ssh connection for gitlab and gitub

laurabenestan/OUTFLANK

laurabenestan/Pinctadapt-RNAseq

Klervi project

laurabenestan/RADseq-for-Mac

RADseq for Mac

laurabenestan/sea_urchin

Sea urchin population genomics

laurabenestan/Seascape_genomics_packages

Useful software and programs to perform seascape genomics analyses

laurabenestan/Sex_lobster

Investigating the influence of fishing on male and female lobster

laurabenestan/TD_science_conservation

TD pour l'UE Science de la conservation