lauralwd
Scientist in training. Plant biology, plant microbial ecology and meta-genomics. Also see https://gist.github.com/lauralwd
@utrechtuniversityUtrecht, Netherlands
Pinned Repositories
2OGD_phylogeny
anabaena_nanopore_workflow
Azolla_genus_meta_pangenome
Azolla_genus_metagenome
This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
azolla_MYBs
Phylogeny and classification of Azolla filiculoides MYB genes
beyond_barcharts_workshop
A workshop on datavisualisation of distribution data, without barcharts!
lauras_phylogeny_wf
Manual workflows for making phylogenetic trees in jupyter notebooks
metagenomicspractical
Hands-on workflow for learning metagenomics including DNA mapping, binning, QC and annotation. Answers and example code available in the branch 'example' or on the practical webpage:
lauralwd's Repositories
lauralwd/metagenomicspractical
Hands-on workflow for learning metagenomics including DNA mapping, binning, QC and annotation. Answers and example code available in the branch 'example' or on the practical webpage:
lauralwd/lauras_phylogeny_wf
Manual workflows for making phylogenetic trees in jupyter notebooks
lauralwd/anabaena_nanopore_workflow
lauralwd/Azolla_genus_metagenome
This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
lauralwd/beyond_barcharts_workshop
A workshop on datavisualisation of distribution data, without barcharts!
lauralwd/2OGD_phylogeny
lauralwd/Azolla_genus_meta_pangenome
lauralwd/azolla_MYBs
Phylogeny and classification of Azolla filiculoides MYB genes
lauralwd/azolla_phd_thesis
My PhD thesis on the (meta)genomics of the amazing floating fern: Azolla
lauralwd/focus_stacked_timelapse
a bash shell script to make focus stacked timelapses of plants using gphoto2
lauralwd/intragenomic_rrna_variability_in_plants
lauralwd/LAR_phylogeny_gungor-et-al-2020
Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.
lauralwd/lauralwd.github.io
See rendered website at www.lauradijkhuizen.com
lauralwd/markdown-paper
Write a LaTeX paper in markdown.
lauralwd/Marlin
Marlin is an optimized firmware for RepRap 3D printers based on the Arduino platform. | Many commercial 3D printers come with Marlin installed. Check with your vendor if you need source code for your specific machine.
lauralwd/MIKC_tree
mikc tree
lauralwd/Nostoc_azollae_pangenomics
Project on the pangenomics of Nostoc azollae, endosymbiont of the Azolla genus