Pinned Repositories
ArchR
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
atac-seq-pipeline
ENCODE ATAC-seq pipeline
atacseq
ATAC-seq peak-calling, QC and differential analysis pipeline
biocmeetup
BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
BIRSBIO2020.scProteomics.exploratory
CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
corral
Dimensionality reduction and batch integration methods for single cell data
corral_manuscript
Frontiers_Supplement
laurenhsu1's Repositories
laurenhsu1/corral
Dimensionality reduction and batch integration methods for single cell data
laurenhsu1/BIRSBIO2020.scProteomics.exploratory
laurenhsu1/corral_manuscript
laurenhsu1/ArchR
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
laurenhsu1/atac-seq-pipeline
ENCODE ATAC-seq pipeline
laurenhsu1/atacseq
ATAC-seq peak-calling, QC and differential analysis pipeline
laurenhsu1/biocmeetup
laurenhsu1/BiocStickers
Stickers for some Bioconductor packages - feel free to contribute and/or modify.
laurenhsu1/CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
laurenhsu1/Frontiers_Supplement
laurenhsu1/Hackathon
Multi-omics studies are available here
laurenhsu1/mcmicro
Multiple-choice microscopy pipeline
laurenhsu1/netbooks
netBooks is a JupyterHub catalog of use cases in gene regulatory network inference using netZoo tools.
laurenhsu1/netZooR
netZooR is a network biology package implemented in R.
laurenhsu1/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
laurenhsu1/whitePaper
Manubot for white paper