A tool which takes a variant file and bams, and creates igv screenshots of each of the variants. Requires a igv.jar to be located in the same directory. (version 1.5 available here http://www.broadinstitute.org/software/igv/download_1.5).
lbergelson/variant-to-igv
A tool which takes a variant file and bams, and creates igv screenshots of each of the variants.
Python