Pinned Repositories
applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
ARMOR
Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
bacass
Simple bacterial assembly and annotation pipeline
binf-unit-coding-challenge
Extract and translate nucleotide sequences into amino acid sequences
biopieces
Biopieces is a bioinformatic framework of tools easily used and easily created.
biopython_lbo
Official git repository for Biopython (originally converted from CVS)
bookdown-start
:book: A Starter Kit for Bookdown
PRRSV
rosalind_problems
repo of the solutions to rosalind problems
lborcard's Repositories
lborcard/PRRSV
lborcard/applied-computational-genomics
Applied Computational Genomics Course at UU: Spring 2020
lborcard/ARMOR
Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data
lborcard/bacass
Simple bacterial assembly and annotation pipeline
lborcard/biopython_lbo
Official git repository for Biopython (originally converted from CVS)
lborcard/coursera_data_exploration
lborcard/rosalind_problems
repo of the solutions to rosalind problems
lborcard/CV
Paula Restrepo's resume/CV
lborcard/docx2tex
Converts Microsoft Word docx to LaTeX
lborcard/latexcv
:necktie: A collection of cv and resume templates written in LaTeX. Leave an issue if your language is not supported!
lborcard/lathe
A tool for generating bacterial genomes from metagenomes with nanopore long read sequencing
lborcard/lbo_unixworkbench
repository for the assignment coursera
lborcard/marimo
A reactive notebook for Python — run reproducible experiments, execute as a script, deploy as an app, and version with git.
lborcard/markdown-cv
a simple template to write your CV in a readable markdown file and use CSS to publish/print it.
lborcard/MARTi
Metagenomic Analysis in Real Time
lborcard/metapep
From metagenomes to epitopes and beyond
lborcard/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
lborcard/mosdepth
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
lborcard/nextprot-collab
lborcard/Python
All Algorithms implemented in Python
lborcard/readfish
CLI tool for flexible and fast adaptive sampling on ONT sequencers
lborcard/repoassignment
repository created for the assignment unix workbench
lborcard/sarscov2-tutorial
Template & tutorial for SARS-CoV-2 analysis
lborcard/shoehorn-java
Implement an adapter from one class to another with minimal code.
lborcard/test-datasets
Test data to be used for automated testing with the nf-core pipelines
lborcard/testrepo
test repo version control
lborcard/tidytable
Tidy interface to 'data.table'
lborcard/unix_workbench_lbo.github.io
sfasdf
lborcard/unix_workbench_lbo.io
github pages for the assignment coursera
lborcard/V-pipe
V-pipe is a pipeline designed for analysing NGS data of short viral genomes