Pinned Repositories
bioScripts
ChIP-AP
An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis
cpu-mem-usage-monitor
Very simple bash and gnuplot script to monitor cpu and memory usage in graph
DGE_workshop
eCLIP
eclipdemux
demultiplex utility for eclip raw fastq files (process eclip barcodes and ramdomers)
indrops
Pipeline for processing inDrops sequencing data
SmartSlurm
tarSmallFiles
To decrease number of small file, keep the folder structure, tar all files less than 1G
ld32's Repositories
ld32/SmartSlurm
ld32/indrops
Pipeline for processing inDrops sequencing data
ld32/tarSmallFiles
To decrease number of small file, keep the folder structure, tar all files less than 1G
ld32/bioScripts
ld32/ChIP-AP
An Integrated Analysis Pipeline for Unbiased ChIP seq Analysis
ld32/cpu-mem-usage-monitor
Very simple bash and gnuplot script to monitor cpu and memory usage in graph
ld32/DGE_workshop
ld32/eCLIP
ld32/eclipdemux
demultiplex utility for eclip raw fastq files (process eclip barcodes and ramdomers)
ld32/github-as-a-database
ld32/HTSbauer
Parsing Bauer Center Sequencing using HMS Orchestra
ld32/init.nvim
An Opinionated Neovim Config for the Minimalists
ld32/jupyter-tutorial
Short tutorial on jupyther, pandas, matplotlib and their capabilities
ld32/markdown_readme
Markdown - you can mark up titles, lists, tables, etc., in a much cleaner, readable and accurate way if you do it with HTML.
ld32/merge_peaks
Pipeline for using IDR to produce a set of peaks given two replicate eCLIP peaks
ld32/nvim
init.vim config file with coc-settings.json for coc.nvim
ld32/oh-my-bash
A delightful community-driven framework for managing your bash configuration, and an auto-update tool so that makes it easy to keep up with the latest updates from the community.
ld32/PEARC-OPEN
ld32/privateGPT
Interact privately with your documents using the power of GPT, 100% privately, no data leaks
ld32/pybind11
Seamless operability between C++11 and Python
ld32/rcbioOptionalEmail
ld32/SCAN2
SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)
ld32/scTE
ld32/singularity-def-files
definition files and wrapper scripts used by NIH HPC staff to install user-facing apps on the Biowulf cluster
ld32/snakemake-converter
This is the development home of the workflow management system Snakemake. For general information, see
ld32/test-conda