Pinned Repositories
2017-03-19_swc_antarc
_libarchive_static_for_cph-feedstock
A conda-smithy repository for _libarchive_static_for_cph.
afni
Official AFNI source and documentation
afni_and_python_axialize_example
afni_ci_test_data
ClearMap
ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.
ds-cookiecutter
Exploration of DS template that includes testing/deployment out of the box.
git_lesson
piday_course_materials
Course materials for Piday reproducibility workshop at NIH adapted from software carpentry lessons
template_making
leej3's Repositories
leej3/ds-cookiecutter
Exploration of DS template that includes testing/deployment out of the box.
leej3/agent-exploration
scratchpad for exploring ai agents
leej3/bioconda-recipes
Conda recipes for the bioconda channel.
leej3/clearml-demo
leej3/cmake-feedstock
A conda-smithy repository for cmake.
leej3/compose-docs
Neurosynth-Compose Documentaiton
leej3/conda-store
Data science environments, for collaboration. ✨
leej3/dagster-cloud-cicd-action
GitHub Action to update Dagster Cloud repo locations
leej3/datalad-paper-joss
Repository for JOSS paper on DataLad
leej3/dotfiles
leej3/heudiconv-joss-paper
Repository to prepare HeuDiConv paper
leej3/ic-sharing-data
Streamlit app to explore sharing data
leej3/ignite
High-level library to help with training and evaluating neural networks in PyTorch flexibly and transparently.
leej3/mriqc
Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain
leej3/opencv-feedstock
A conda-smithy repository for opencv.
leej3/osm
OpenSciMetrics (OSM) applies NLP and LLM-based metrics and indicators related to transparency, data sharing, rigor, and open science on biomedical publications.
leej3/pandoc_resume
leej3/pybids
Python tools for querying and manipulating BIDS datasets.
leej3/python-cspade
Python wrapper for Zaki's CSPADE algorithm
leej3/python-feedstock
A conda-smithy repository for python.
leej3/qhub-cloud
QHub deployment tool
leej3/r-rdsdp-feedstock
A conda-smithy repository for r-rdsdp.
leej3/RBioFormats
:books: R interface to the Bio-Formats library
leej3/retry
Retries a GitHub Action step on failure or timeout
leej3/rtransparent
The rtransparent R package.
leej3/scikit-image
Image processing in Python
leej3/sparse
Sparse multi-dimensional arrays for the PyData ecosystem
leej3/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
leej3/taco
The Tensor Algebra Compiler (taco) computes sparse tensor expressions on CPUs and GPUs
leej3/ultralytics
NEW - YOLOv8 🚀 in PyTorch > ONNX > OpenVINO > CoreML > TFLite