Pinned Repositories
arc-pytorch
PyTorch implementation of Attentive Recurrent Comparators
betafold
bl-dca
CCMgen
choix
Inference algorithms for models based on Luce's choice axiom
climin
Optimizers for machine learning
DRfold
pytorchlearn
ResPRE
ResPRE is an algorithm for protein residue-residue contact-map prediction
leeyang's Repositories
leeyang/DRfold
leeyang/ResPRE
ResPRE is an algorithm for protein residue-residue contact-map prediction
leeyang/arc-pytorch
PyTorch implementation of Attentive Recurrent Comparators
leeyang/pytorchlearn
leeyang/betafold
leeyang/bl-dca
leeyang/CCMgen
leeyang/choix
Inference algorithms for models based on Luce's choice axiom
leeyang/logisticMF
Matrix Factorization for categorical data
leeyang/missForest
missForest is a nonparametric, mixed-type imputation method for basically any type of data for the statistical software R.
leeyang/pylbfgs
:mountain_cableway: Python/Cython wrapper for liblbfgs
leeyang/cv
TeX files for my curriculum vitae
leeyang/DCNv2
Deformable Convolutional Networks v2 with Pytorch
leeyang/deepcontact
fork from https://github.com/largelymfs/deepcontact
leeyang/examples
A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.
leeyang/hh-suite
Remote protein homology detection suite.
leeyang/leeyang.github.io
leeyang/memory-efficient-attention
Memory Efficient Attention (O(sqrt(n)) for Jax and PyTorch
leeyang/ML-From-Scratch
Machine Learning From Scratch. Bare bones Python implementations of machine learning models and algorithms with a focus on accessibility. Aims to cover everything from data mining to deep learning.
leeyang/nlp-stuff
leeyang/openfold
Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2
leeyang/prefpy
Collection of Python scripts for preference aggregation, estimation, and generation. Currently under initial development
leeyang/PythonCall.jl
Python and Julia in harmony.
leeyang/RaptorX-Contact
Deep residual neural network for protein contact/distance prediction developed by Xu group
leeyang/rgn
Recurrent Geometric Networks for end-to-end differentiable learning of protein structure
leeyang/tensorcode
leeyang/tensorlayer
TensorLayer: Deep Learning and Reinforcement Learning Library for TensorFlow.
leeyang/tensorlayer_learning
leeyang/test
leeyang/word2vec-keras-in-gensim
word2vec uisng keras inside gensim