/synthea_omop_ELT

Data pipeline ELT project from Synthea to OMOP CDM

Primary LanguagePython

ELT pipeline from Synthea csv data to OMOP CDM with Airflow, dbt Core, Cosmos

Welcome! illustrating a realistic data pipeline implemented from extracting electronic medical records (EMR), various medical vocabularies, loading onto a database and conducting transformation using dbt, while the workflow is orchestrated, scheduled and monitored using Apache airflow.

The pipeline in this repo is described in more detail easydata - Portfolio project

Key tools used: