/PsychOpen-CAMA-R-package

R Package used in PsychOpenCAMA

Primary LanguageRGNU General Public License v3.0GPL-3.0

PsychOpen-CAMA-R-package

R package for the PsychOpen CAMA project (https://cama.psychopen.eu) - PsychOpen CAMA enables accessing meta-analytic datasets, reproducing meta-analyses and dynamically updating evidence from new primary studies collaboratively. Functions from the package are used to generate content for the php based gui of the application. The re use of this package is limited since the functions are adapted to be used with our php gui.

Following R packages are used:

dmetar
Harrer, M., Cuijpers, P., Furukawa, T. & Ebert, D. D. (2019). dmetar: Companion R Package For The Guide 'Doing Meta-Analysis in R'. R package version 0.0.9000. URL http://dmetar.protectlab.org.

GGally
Barret Schloerke, Di Cook, Joseph Larmarange, Francois Briatte, Moritz Marbach, Edwin Thoen, Amos Elberg and Jason Crowley (2020). GGally: Extension to 'ggplot2'. R package version 2.0.0. https://CRAN.R-project.org/package=GGally

ggplot2
H. Wickham. ggplot2: Elegant Graphics for Data Analysis. Springer-Verlag New York, 2016.

jsonlite
Jeroen Ooms (2014). The jsonlite Package: A Practical and Consistent Mapping Between JSON Data and R Objects. arXiv:1403.2805 [stat.CO] URL https://arxiv.org/abs/1403.2805.

labelVector
Benjamin Nutter (2020). labelVector: Label Attributes for Atomic Vectors. R package version 0.1.1. https://CRAN.R-project.org/package=labelVector

meta
Balduzzi S, Rücker G, Schwarzer G (2019), How to perform a meta-analysis with R: a practical tutorial, Evidence-Based Mental Health; 22: 153-160.

metafor
Viechtbauer, W. (2010). Conducting meta-analyses in R with the metafor package. Journal of Statistical Software, 36(3), 1-48. URL: https://www.jstatsoft.org/v36/i03/

metapower
Griffin, J.W. (2020). metapoweR: an R package for computing meta-analytic statistical power. R package version 0.2.0

metaviz
Michael Kossmeier, Ulrich S. Tran and Martin Voracek (2020). metaviz: Forest Plots, Funnel Plots, and Visual Funnel Plot Inference for Meta-Analysis. R package version 0.3.1. https://CRAN.R-project.org/package=metaviz

netmeta
Gerta Rücker, Ulrike Krahn, Jochem König, Orestis Efthimiou and Guido Schwarzer (2020). netmeta: Network Meta-Analysis using Frequentist Methods. R package version 1.2-1. https://CRAN.R-project.org/package=netmeta

psych
Revelle, W. (2020) psych: Procedures for Personality and Psychological Research, Northwestern University, Evanston, Illinois, USA, https://CRAN.R-project.org/package=psych Version =2.0.9,.

pwr
Stephane Champely (2020). pwr: Basic Functions for Power Analysis. R package version 1.3-0. https://CRAN.R-project.org/package=pwr

The package also includes several datasets

See: PsychArchives.