Lemas Lab

Pinned Repositories

BEACH
The Breastfeeding and EArly Child Health (BEACH) Study
0 2 84
BEACH-EHR-PRESENTATION
Information regarding presentation on the extraction of data from the Epic EHR database.
Language:R2 3 10
BEACH-reports
Language:HTML1 1 203
CAMP
predicting peptide-protein interactions
Language:Python2 2 82
ehr-preeclampsia-model
Use mom-baby EHR to validate ShinyApp model. The goal of the project is to predict infant delivery for mothers with preeclampsia.
Language:HTML2 3 130
lemaslab.github.io
The LemasLab website at the University of Florida
Language:Python1 3 1540
nlp-perinatal
this repo contains code for the analysis of perinatal clinical notes
Language:R0 2 20
project-template
Language:R1 2 11
reproducible_metabolomics_study_checklist
Checklist for making computational steps of clinical metabolomics study reproducible
1 3 10
rump
A Reproducible Untargeted Metabolomics Data Processing Pipeline
Language:HTML11 3 338

Lemas Lab's Repositories

lemaslab/rump
A Reproducible Untargeted Metabolomics Data Processing Pipeline
Language:HTML11 3 338
lemaslab/BEACH-EHR-PRESENTATION
Information regarding presentation on the extraction of data from the Epic EHR database.
Language:R2 3 10
lemaslab/CAMP
predicting peptide-protein interactions
Language:Python2 2 82
lemaslab/ehr-preeclampsia-model
Use mom-baby EHR to validate ShinyApp model. The goal of the project is to predict infant delivery for mothers with preeclampsia.
Language:HTML2 3 130
lemaslab/BEACH-reports
Language:HTML1 1 203
lemaslab/lemaslab.github.io
The LemasLab website at the University of Florida
Language:Python1 3 1540
lemaslab/project-template
Language:R1 2 11
lemaslab/reproducible_metabolomics_study_checklist
Checklist for making computational steps of clinical metabolomics study reproducible
1 3 10
lemaslab/ampliseq
16S rRNA amplicon sequencing analysis workflow using QIIME2
Language:Nextflow0 1 00
lemaslab/BEACH
The Breastfeeding and EArly Child Health (BEACH) Study
0 2 84
lemaslab/BEACH-cdrisc
Language:HTML0 3 00
lemaslab/Docker
Language:R0 2 20
lemaslab/ehr-database
Explore descriptive statistics of data we have
Language:R0 3 70
lemaslab/Informatics_Team_Meeting_Schedule
Meeting Schedule of Lemas Lab Informatics Team at University of Florida
0 3 02
lemaslab/nlp-perinatal
this repo contains code for the analysis of perinatal clinical notes
Language:R0 2 20
lemaslab/awc_lcms_metabolomics
The objective of this study is to develop an automated workflow composition system for LC-HRMS metabolomics data processing.
Language:Shell2 0
lemaslab/BEACH-interview
data analysis for BEACH interview study in 40 pregnant and breastfeeding women in Alachua County
Language:R3 0
lemaslab/gatorberry
build a raspberry pi cluster with SLURM installed and assemble viral genome
Language:R3 01
lemaslab/GEI
Language:R2 0
lemaslab/HDP_scoping_review
Language:R2 0
lemaslab/hmdbtaxonomy
Language:R2 0
lemaslab/Manuscript-DNNs-for-Classification-of-LCMS-Peaks
Code associated with the manuscript: Deep Neural Networks for Classification of LC-MS Spectral Peaks
Language:R1 01
lemaslab/microbes
Language:R2 0
lemaslab/nlp-recipes
Natural Language Processing Best Practices & Examples
Language:Python1 0
lemaslab/OMOP2OBO
OMOP2OBO: A Python Library for mapping OMOP standardized clinical terminologies to Open Biomedical Ontologies
Language:Jupyter Notebook0 0
lemaslab/pediatric-abx-mod
UFHealth Mom-baby linked electronic health records
Language:R2 3
lemaslab/r-demo
space to demo r-packages that can be moved to other projects.
Language:R2 0
lemaslab/RAnalysisSkeleton
Files and settings commonly used in analysis projects with R
Language:R1 01
lemaslab/shiny-app-template
Template for creating Shiny web applications
Language:Python1 01