Pinned Repositories
4Dsurvival
Deep learning cardiac motion analysis for survival prediction
a-large-image-tiler
(Python3, PyQt5) GUI software to tile large images. Designed to image 96-well plates used in wet labs.
brainmap
Allen Brain Atlas utilities, parsers and data structures
CairoSVG
CairoSVG is a SVG converter based on Cairo. It can export SVG files to PDF, PostScript and PNG files.
disentangling-pathogens-SM
Supplementary Material (R notebook) for the paper "Disentangling bacterial invasiveness from lethality in an experimental host-pathogen system"
dotfiles
Snow repository for OSX dotfiles
movable-items
(Python, PyQt5) Show how to implement movable objects in PyQt w/o using the itemIsMovable flag.
Stochastic-multidimensional-LV
Stochastic implementation of a Lotka-Volterra competition model extended to multidimensional niche spaces (published in 10.1103/PhysRevE.91.052107)
tutorials2019
unet
unet for image segmentation
lewlin's Repositories
lewlin/a-large-image-tiler
(Python3, PyQt5) GUI software to tile large images. Designed to image 96-well plates used in wet labs.
lewlin/disentangling-pathogens-SM
Supplementary Material (R notebook) for the paper "Disentangling bacterial invasiveness from lethality in an experimental host-pathogen system"
lewlin/dotfiles
Snow repository for OSX dotfiles
lewlin/tutorials2019
lewlin/unet
unet for image segmentation
lewlin/4Dsurvival
Deep learning cardiac motion analysis for survival prediction
lewlin/CairoSVG
CairoSVG is a SVG converter based on Cairo. It can export SVG files to PDF, PostScript and PNG files.
lewlin/chunkwm
Tiling window manager for macOS based on plugin architecture
lewlin/classification_models
Classification models trained on ImageNet. Keras.
lewlin/Datasets-analysis
My analyses/ML predictions for common datasets publicly available from the Internet
lewlin/Deep_reinforcement_learning_Course
Implementations from the free course Deep Reinforcement Learning with Tensorflow
lewlin/few-shot
Repository for few-shot learning machine learning projects
lewlin/ICIAR2018
Two-Stage Convolutional Neural Network for Breast Cancer Histology Image Classification. ICIAR 2018 Grand Challenge on BreAst Cancer Histology images (BACH)
lewlin/keras-applications
Reference implementations of popular deep learning models.
lewlin/keras-contrib
Keras community contributions
lewlin/lewlin.github.io
My academic webpage
lewlin/lewlin.github.iOLD
My personal/academic webpage
lewlin/material_darker_mpl
matplotlib style file for the material darker theme
lewlin/models
Models and examples built with TensorFlow
lewlin/MouseBrainAtlas
A system for building mouse brain atlas from histology series
lewlin/My-Python
Cools things about Python that surprised me, coming from a C background
lewlin/NMFreg_tutorial
A tutorial on NMFreg applied to cerebellum data.
lewlin/novosparc
lewlin/openstreetmap-website
The Rails application that powers OpenStreetMap
lewlin/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
lewlin/score_sde
Official code for Score-Based Generative Modeling through Stochastic Differential Equations (ICLR 2021, Oral)
lewlin/score_sde_pytorch
PyTorch implementation for Score-Based Generative Modeling through Stochastic Differential Equations (ICLR 2021, Oral)
lewlin/segmentation_models
Segmentation models with pretrained backbones. Keras.
lewlin/tf_unet
Generic U-Net Tensorflow implementation for image segmentation
lewlin/voxelmorph
Unsupervised Learning for Image Registration