Pinned Repositories
avf
This is a repository that implements a workflow for whole genome alignment (mainly for bacteria assembly data with a ".fna" file), variant calling and format conversion (VCF to STRUCTURE, Pritchard) setting up the dataset in a suitable format for bayesian clustering analysis.
hybrider
Pipeline for population genetics analysis of putatively hybrid species: Genetic structure characterization and signal SNPs selection
lncinference
This is a repository for collaboration to implement the transcript reconstruction pipeline for long non-coding RNAs using long reads from Oxford Nanopore..
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
primeira_filogenia
Minicurso de filogenia ministrado durante o evento Semana Portas Abertas PPGBIOINFO em 2023
test-datasets
Test data to be used for automated testing with the nf-core pipelines
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
lfreitasl's Repositories
lfreitasl/hybrider
Pipeline for population genetics analysis of putatively hybrid species: Genetic structure characterization and signal SNPs selection
lfreitasl/avf
This is a repository that implements a workflow for whole genome alignment (mainly for bacteria assembly data with a ".fna" file), variant calling and format conversion (VCF to STRUCTURE, Pritchard) setting up the dataset in a suitable format for bayesian clustering analysis.
lfreitasl/lncinference
This is a repository for collaboration to implement the transcript reconstruction pipeline for long non-coding RNAs using long reads from Oxford Nanopore..
lfreitasl/modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
lfreitasl/primeira_filogenia
Minicurso de filogenia ministrado durante o evento Semana Portas Abertas PPGBIOINFO em 2023
lfreitasl/test-datasets
Test data to be used for automated testing with the nf-core pipelines