lgatto

Open science, reproducible research, bioinformatics, computational biology, proteomics, more omics, emacs, a lot of R, running and parenting.

de Duve Institute, UCLouvainBelgium

Pinned Repositories

fmsne
R package implementing fast multi-scale neighour embedding
Language:R1 3 11
IntroMachineLearningWithR
An Introduction to Machine Learning with R
Language:R77 11 336
MSnbase
Base Classes and Functions for Mass Spectrometry and Proteomics
Language:R128 14 43946
pRoloc
A unifying bioinformatics framework for organelle proteomics
Language:R15 5 13314
rbc
R boot-camp
Language:R26 9 015
RforProteomics
Using R and Bioconductor packages for the analysis and comprehension of proteomics data.
Language:TeX90 16 634
rols
An R package to query EBI's Ontology Lookup Service (OLS)
Language:R11 5 446
rpx
R Interface to the ProteomeXchange Repository
Language:R5 3 242
TeachingMaterial
Various teaching material
Language:HTML180 29 080
tidies
A Grammar of Data Manipulation for Omics Data
Language:R21 4 82

lgatto's Repositories

lgatto/MSnbase
Base Classes and Functions for Mass Spectrometry and Proteomics
Language:R128 14 43946
lgatto/pRoloc
A unifying bioinformatics framework for organelle proteomics
Language:R15 5 13314
lgatto/lgatto.github.io
My github page
Language:SCSS11 5 915
lgatto/rols
An R package to query EBI's Ontology Lookup Service (OLS)
Language:R11 5 446
lgatto/pRolocGUI
Interactive visualisation and exploration of spatial proteomics data
Language:R8 4 1135
lgatto/pRolocdata
Data accompanying the pRoloc package
Language:R5 4 525
lgatto/sequences
Educational package used in an R course to illustrate OO programming and package development.
Language:R5 4 34
lgatto/2024_scpworkshop_EUBIC
Processing and analysing single-cell proteomics with the scp Bioconductor package.
3 2 0
lgatto/qcmetrics
An R framework for quality control
Language:R2 4 24
lgatto/msmbstyle
Language:R1 3 0
lgatto/physalia2024
Language:R1 2 01
lgatto/2023_06_15_CSAMA_Brixen
CSAMA2023 slides
Language:JavaScript2 0
lgatto/2024_02_01_FenetreOuverte
Fenêtre ouverte sur le supérieur
lgatto/2024_05_30_IA_IRSS
Language:HTML
lgatto/2024_06_27_CSAMA_Brixen
CSAMA 2024 lecture notes
Language:JavaScript
lgatto/bioconductor.org
Website for bioconductor.org
Language:HTML3 0
lgatto/BiocWorkingGroups
Bioconductor working group guidelines. Also, a list of active, suggested, and inactive working groups for bioconductor for the community to volunteer to be apart of. The community is also welcome to suggest new working groups.
Language:TeX1 0
lgatto/bookdown
Authoring Books and Technical Documents with R Markdown
Language:JavaScript0 0
lgatto/CSAMA_website
Website for CSAMA
Language:CSS1 0
lgatto/essgd
Language:Emacs Lisp1 0
lgatto/EuroBioC2024
material for the European Bioconductor annual conference 2024
Language:CSS0 0
lgatto/EuroBioC2025
Website of the European Bioconductor Conference 2025
Language:CSS
lgatto/guix-bioc
Generated collection of Bioconductor packages for GNU Guix.
lgatto/lgatto
My /special/ repo
lgatto/micropython
Port of MicroPython for the BBC micro:bit
lgatto/mooc-rr2-git-annex
lgatto/plothistory
Save all plot produced in or across sessions
Language:R2 41
lgatto/roxygen2
Generate R package documentation from inline R comments
Language:R1 0
lgatto/S7
S7: a new OO system for R
Language:R
lgatto/SharedObject
Sharing R objects across multiple R processes without duplicating the object in memory