liameabbott

annotationdb

Hail annotation database scripts and metadata

bayesMCMC_R_package

R package implementing Metropolis-Hastings and Gibbs sampler MCMC algorithms

bulk-rna-seq-pipeline

cloudtools

Scripts for working with Google Cloud Dataproc service

CRISPResso2

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

data_manipulation_in_python

Collection of data retrieval and manipulation projects using Python

drop-seq-tools-pipeline

hail

Scalable genetic data analysis.

UK_Biobank_GWAS

Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

liameabbott/bayesMCMC_R_package

R package implementing Metropolis-Hastings and Gibbs sampler MCMC algorithms

liameabbott/annotationdb

Hail annotation database scripts and metadata

liameabbott/bulk-rna-seq-pipeline

liameabbott/cloudtools

Scripts for working with Google Cloud Dataproc service

liameabbott/CRISPResso2

Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments

liameabbott/data_manipulation_in_python

Collection of data retrieval and manipulation projects using Python

liameabbott/drop-seq-tools-pipeline

liameabbott/dsbowl2018

liameabbott/hail

Scalable genetic data analysis.

liameabbott/UK_Biobank_GWAS

Overview of the data QC, code, and GWAS summary output from the 2017 UK Biobank data release

liameabbott/epiApp

liameabbott/liameabbott.github.io

liameabbott/machine_learning_in_R

Collection of projects implemented in R

liameabbott/medicare_state_comparison_analysis

A comparison of Medicare payment data in Massachusetts and Tennessee in 2013

liameabbott/named_entity_recognition

liameabbott/PHESANT

PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank

liameabbott/reference-database

liameabbott/rosalind

Collection of solutions for bioinformatics coding challenges from the Rosalind project (see rosalind.info)

liameabbott/SpiecEasi

Sparse InversE Covariance estimation for Ecological Association and Statistical Inference

liameabbott/statgen-utils

Utility scripts for typical statistical genetics tasks.

liameabbott/statistical_computing_cpp

Collection of programs related to statistical computing written in C++

liameabbott/tb-gene-signature-pipeline

liameabbott/transformers

🤗 Transformers: State-of-the-art Machine Learning for Pytorch, TensorFlow, and JAX.

liameabbott/useful-code

liameabbott/yelp_bigram_analysis_project

An analysis of bigrams occurring in the user reviews of bars in the Yelp Dataset Challenge dataset