This repository contains the data analysis code used in the manuscript:
Mapping of promoter usage QTL using RNA-seq data reveals their contributions to complex traits. Naoto Kubota, Mikita Suyama. PLoS Comput. Biol. 18(8): e1010436. 2022. https://doi.org/10.1371/journal.pcbi.1010436
Here is the link of puQTL association results: https://zenodo.org/record/6269326
- Python (3.8.5)
- Pandas (1.1.3)
- Matplotlib (3.3.1)
- Seaborn (0.11.0)
- Scipy (1.6.2)
- Docker (20.10.7)