pRoloc is a Bioconductor package for the analysis of spatial proteomics data analysis. It is available from Bioconductor >= 2.12 and requires R (>= 3.0.0). The recommended installation procedure uses the Bioconductor infrastructure:

The preferred installation procedure uses the Bioconductor infrastructure:

source("http://bioconductor.org/biocLite.R")
biocLite("pRoloc")

You can also install the associated data package pRolocdata with multiple experimental data sets.