lichenthrope

lichenthrope's Stars

• SmithsonianWorkshops/Species_Delimitation_2021_08

  Materials for the virtual Species Delimitation workshop, held August 16-20, 2021

  106

• rdmpage/geojson-phylogeny

  Displaying a phylogeny on a map using GeoJSON

  Language:PHP42

• liamrevell/phytools

  Language:R21156

• beiko-lab/gengis

  GenGIS (pronounced 'Genghis' like Genghis Khan) is a bioinformatics application that allows users to combine digital map data with information about biological sequences collected from the environment. GenGIS provides a 3D graphical interface in which the user can navigate and explore the data, as well as a Python interface that allows easy scripting of statistical analyses using the Rpy libraries.

  Language:C++2713

• ruanjue/smartdenovo

  Ultra-fast de novo assembler using long noisy reads

  Language:C12930

• fbreitwieser/pavian

  🌈 Interactive analysis of metagenomics data

  Language:R38976

• bioinformatics-core-shared-training/r-crash-course

  half-day introduction to the R language

  Language:HTML1919

• YuLab-SMU/ggtree

  :christmas_tree:Visualization and annotation of phylogenetic trees

  Language:R839172

• qinwf/awesome-R

  A curated list of awesome R packages, frameworks and software.

  Language:R6k1.5k

• dreamRs/esquisse

  RStudio add-in to make plots interactively with ggplot2

  Language:R1.8k232

• prog4biol/evop2020

  Python in 2 days for EVOP 2020 in Berlin

  Language:Python35

• andreafabrizi/Dropbox-Uploader

  Dropbox Uploader is a BASH script which can be used to upload, download, list or delete files from Dropbox, an online file sharing, synchronization and backup service.

  Language:Shell6.6k1.1k

• kkdey/ecostructure

  Clustering and Visualization of species abundance patterns in ecological data

  Language:R62

• SmithsonianWorkshops/DataCarpentry_Feb2018

  Materials for a Data Carpentry course taught at NMNH on February 7 and 8, 2018.

  Language:Jupyter Notebook3

• OpenRefine/OpenRefine

  OpenRefine is a free, open source power tool for working with messy data and improving it

  Language:Java10.9k2k

• biocore/biom-format

  The Biological Observation Matrix (BIOM) Format Project

  Language:Python9295

• SmithsonianWorkshops/metabarcoding

  Materials for a 2-day introductory metabarcoding workshop held 10/2-10/3/2017 at SERC.

  3

• frederic-mahe/swarm

  A robust and fast clustering method for amplicon-based studies

  Language:Python315

• torognes/swarm

  A robust and fast clustering method for amplicon-based studies

  Language:C++12623