likeajumprope

Machine Learning, Neuroimaging, Normative Models, Bayesian Models, @ohbm, @brainhackorg, @brainhack-aus, Open Science @openscieny, editor @openjournals

Donders Institute for Brain, Cognition and BehaviourNetherlands

Pinned Repositories

academicpages.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
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awesome
😎 Awesome lists about all kinds of interesting topics
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Bayesian_normative_models
Code & instructions to the paper "Accommodating site variation in neuroimaging data using normative and hierarchical Bayesian models", published in NeuroImage
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Git_course
Git course
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Git_for_librarians
Where the github for librarians repository lives
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JohannaBayer
Johanna Bayer's (@likeajumprope's) website
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PCNtoolkit
Toolbox for normative modelling and spatial inference of neuroimaging data. https://pcntoolkit.readthedocs.io/en/latest/
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PhysIO-Live
Home of the PhysIO Matlab Livescript files.
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tapas
TAPAS - Translational Algorithms for Psychiatry-Advancing Science
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rse-aunz.github.io
Website for Research Software Engineers (Australia & New Zealand)
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likeajumprope's Repositories

likeajumprope/dev-tools-train-track
Instructions for the Development tools (VS Code) train track
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likeajumprope/Web-Scraping-PubMed
This Python Program takes a keyword and outputs n abstracts + bibliographies from PubMed
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likeajumprope/BIDS_tutorial
OHBM Brainhack 2020 Asia Pacific Hub BIDS Traintrack
likeajumprope/bio-Turing-Way
Experimenting with JupyterBooks, Sphinx, and training materials for biomed/life sciences from the Turing Way.
likeajumprope/brainhack_jupyter_book
A Jupyter Book of everything Brainhack: past, present and future.
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likeajumprope/brainhackorg.github.io
brainhack events webpage
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likeajumprope/CovBat_Harmonization
Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data
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likeajumprope/cultofthepartyparrot.com
PARTY OR DIE
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likeajumprope/exercises
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likeajumprope/global2020
Brainhack Global 2020
likeajumprope/global2021
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likeajumprope/GSP
likeajumprope/hackathon2020
Website for the 2020 OHBM Hackathon (Location: 3rd planet from the Sun)
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likeajumprope/neuroCombat
Harmonization of multi-site imaging data with ComBat (Python)
likeajumprope/neuroCombat_Rpackage
neuroCombat R package
likeajumprope/neurocommand
A flexible, scalable, and easy to use data analysis environment for reproducible neuroimaging
likeajumprope/neuroHarmonize
Harmonization tools for multi-site neuroimaging analysis. Implemented as a python package. Harmonization of MRI, sMRI, dMRI, fMRI variables with support for NIFTI images! Complements the work in Neuroimage by Pomponio et al. (2019).
likeajumprope/NeuroMiner-1
Git repo for NeuroMiner 1.05
likeajumprope/NH19-Visualization
A collection of notebooks demonstrating plotting with matplotlib
likeajumprope/osr2021
Website for the Open Science Room at the OHBM 2021 meeting
likeajumprope/ossig
Website for the OHBM Open Science Special Interest Group
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likeajumprope/plstuto
Tutorials to apply cross decomposition methods in python
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likeajumprope/pytrends
Pseudo API for Google Trends
likeajumprope/R_training_2022
R training at Orygen 2022 by Caroline Gao
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likeajumprope/reproschema-library
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likeajumprope/sample_dataset
Sample dataset for problem set 5
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likeajumprope/singularity-stan
likeajumprope/sparkle
Sparkle Online Event Platform
likeajumprope/studyforrest-data-structural
studyforrest.org: Structural scans (T1, T2, SWI, DTI)
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likeajumprope/transparent-singularity
Deploying a singularity container so that it behaves like one would have installed software natively