/Transcriptome_analysis

Transcriptome_analysis

  • Create by Wenchun Luo, Caihua Zhang, Yongzhi Yang. Date: Sat Mar 25 11:04:06 CST 2017

Tophat2->cufflinks->cuffdiff/edger/DEGseq
HISAT2->StringTie->Ballgown

HISAT2->StringTie->Ballgown 基本流程，（Pertea, Mihaela, et al. "Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown." Nature Protocols 11.9 (2016): 1650-1667.）：
Image text