Pinned Repositories
Atlas-CNV
Method to detect exonic CNVs in NGS Gene Targeted Panels
bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
bed_annotation
Assign gene names to regions in a BED file
EasyAmplicon
Easy Amplicon data analysis pipeline
EasyMetagenome
Easy Metagenome Pipeline
gargammel
gargammel is an ancient DNA simulator
gatk
Official code repository for GATK versions 4 and up
hap.py
Haplotype VCF comparison tools
hello-algorithm
🌍 针对小白的算法训练 | 包括四部分：①.大厂面经 ②.力扣图解 ③.千本开源电子书 ④.百张技术思维导图（项目花了上百小时，希望可以点 star 支持，🌹感谢~）点击下方网站，马上开始刷题！
iCallSV
A Framework to call Structural Variants from NGS based datasets
limingxiang's Repositories
limingxiang/Atlas-CNV
Method to detect exonic CNVs in NGS Gene Targeted Panels
limingxiang/bamsurgeon
tools for adding mutations to existing .bam files, used for testing mutation callers
limingxiang/bed_annotation
Assign gene names to regions in a BED file
limingxiang/EasyAmplicon
Easy Amplicon data analysis pipeline
limingxiang/EasyMetagenome
Easy Metagenome Pipeline
limingxiang/gargammel
gargammel is an ancient DNA simulator
limingxiang/gatk
Official code repository for GATK versions 4 and up
limingxiang/hap.py
Haplotype VCF comparison tools
limingxiang/hello-algorithm
🌍 针对小白的算法训练 | 包括四部分：①.大厂面经 ②.力扣图解 ③.千本开源电子书 ④.百张技术思维导图（项目花了上百小时，希望可以点 star 支持，🌹感谢~）点击下方网站，马上开始刷题！
limingxiang/iCallSV
A Framework to call Structural Variants from NGS based datasets
limingxiang/jxcnv
Discover CNV using HMM model which is implemented by python.
limingxiang/limingxiang
Config files for my GitHub profile.
limingxiang/machine-learning-interview
算法工程师-机器学习面试题总结
limingxiang/MONOD2
MONOD2 is a toolkit for methylation haplotype analysis of bisulfite sequencing data
limingxiang/My_Scripts
limingxiang/NGS-analysis
二代测序数据分析
limingxiang/ohmyzsh
🙃 A delightful community-driven (with 1800+ contributors) framework for managing your zsh configuration. Includes nearly 300 optional plugins (rails, git, OSX, hub, docker, homebrew, node, php, python, etc), over 140 themes to spice up your morning, and an auto-update tool so that makes it easy to keep up with the latest updates from the community.
limingxiang/omim
omim database
limingxiang/ROH
Pipeline for ROH analysis for ancient genomes (Cebellos, Gürün et al. 2021, Current Biology)