/c-di-GMP

Mapping domain co-occurrence networks with emphasis on c-d-GMP binding domains.

Primary LanguageJupyter Notebook

This is a project for Michael Lynch's Evolutions of proteins and cells class.

I wanted to learn more about some signaling mechanisms and asked if anyone was interested in collaborating in a project.
Melene came up with c-di-gmp which is a pretty interesting bacterial signaling molecule. We eventually decided to look into c-di-gmp binding domains in the domain co-occurrance networks for a whole bunch of bacteria. This analysis ensued.