Must-read papers on GNN

GNN: graph neural network

Contributed by Jie Zhou, Ganqu Cui, Zhengyan Zhang and Yushi Bai.

Content

1. Survey
2. Models
2.1 Basic Models	2.2 Graph Types
2.3 Pooling Methods	2.4 Analysis
2.5 Efficiency
3. Applications
3.1 Physics	3.2 Chemistry and Biology
3.3 Knowledge Graph	3.4 Recommender Systems
3.5 Computer Vision	3.6 Natural Language Processing
3.7 Generation	3.8 Combinatorial Optimization
3.9 Adversarial Attack	3.10 Graph Clustering
3.11 Graph Classification	3.12 Reinforcement Learning
3.13 Traffic Network	3.14 Few-shot and Zero-shot Learning
3.15 Program Representation	3.16 Social Network
3.17 Graph Matching	3.18 Computer Network

Survey papers

Introduction to Graph Neural Networks. Synthesis Lectures on Artificial Intelligence and Machine Learning, Morgan & Claypool Publishers, 2020. book

Zhiyuan Liu, Jie Zhou.
Graph Neural Networks: A Review of Methods and Applications. arxiv 2018. paper

Jie Zhou, Ganqu Cui, Zhengyan Zhang, Cheng Yang, Zhiyuan Liu, Maosong Sun.
A Comprehensive Survey on Graph Neural Networks. arxiv 2019. paper

Zonghan Wu, Shirui Pan, Fengwen Chen, Guodong Long, Chengqi Zhang, Philip S. Yu.
Adversarial Attack and Defense on Graph Data: A Survey. arxiv 2018. paper

Lichao Sun, Yingtong Dou, Carl Yang, Ji Wang, Philip S. Yu, Bo Li.
Deep Learning on Graphs: A Survey. arxiv 2018. paper

Ziwei Zhang, Peng Cui, Wenwu Zhu.
Relational Inductive Biases, Deep Learning, and Graph Networks. arxiv 2018. paper

Battaglia, Peter W and Hamrick, Jessica B and Bapst, Victor and Sanchez-Gonzalez, Alvaro and Zambaldi, Vinicius and Malinowski, Mateusz and Tacchetti, Andrea and Raposo, David and Santoro, Adam and Faulkner, Ryan and others.
Geometric Deep Learning: Going beyond Euclidean data. IEEE SPM 2017. paper

Bronstein, Michael M and Bruna, Joan and LeCun, Yann and Szlam, Arthur and Vandergheynst, Pierre.
Computational Capabilities of Graph Neural Networks. IEEE TNN 2009. paper

Scarselli, Franco and Gori, Marco and Tsoi, Ah Chung and Hagenbuchner, Markus and Monfardini, Gabriele.
Neural Message Passing for Quantum Chemistry. ICML 2017. paper

Gilmer, Justin and Schoenholz, Samuel S and Riley, Patrick F and Vinyals, Oriol and Dahl, George E.
Non-local Neural Networks. CVPR 2018. paper

Wang, Xiaolong and Girshick, Ross and Gupta, Abhinav and He, Kaiming.
The Graph Neural Network Model. IEEE TNN 2009. paper

Scarselli, Franco and Gori, Marco and Tsoi, Ah Chung and Hagenbuchner, Markus and Monfardini, Gabriele.
Benchmarking Graph Neural Networks. arxiv 2020. paper

Dwivedi, Vijay Prakash and Joshi, Chaitanya K. and Laurent, Thomas and Bengio, Yoshua and Bresson, Xavier.
Foundations and modelling of dynamic networks using Dynamic Graph Neural Networks: A survey. arxiv 2020. paper

Skarding, Joakim and Gabrys, Bogdan and Musial, Katarzyna.
Bridging the Gap between Spatial and Spectral Domains: A Survey on Graph Neural Networks. arxiv 2020. paper

Zhiqian Chen, Fanglan Chen, Lei Zhang, Taoran Ji, Kaiqun Fu, Liang Zhao, Feng Chen, Chang-Tien Lu.

Models

Basic Models

Supervised Neural Networks for the Classification of Structures. IEEE TNN 1997. paper

Alessandro Sperduti and Antonina Starita.
Graphical-Based Learning Environments for Pattern Recognition. SSPR/SPR 2004. paper

Franco Scarselli, Ah Chung Tsoi, Marco Gori, Markus Hagenbuchner.
A new model for learning in graph domains. IJCNN 2005. paper

Marco Gori, Gabriele Monfardini, Franco Scarselli.
Graph Neural Networks for Ranking Web Pages. WI 2005. paper

Franco Scarselli, Sweah Liang Yong, Marco Gori, Markus Hagenbuchner, Ah Chung Tsoi, Marco Maggini.
Neural Network for Graphs: A Contextual Constructive Approach. IEEE TNN 2009. paper

Alessio Micheli.
Spectral Networks and Locally Connected Networks on Graphs. ICLR 2014. paper

Joan Bruna, Wojciech Zaremba, Arthur Szlam, Yann LeCun.
Deep Convolutional Networks on Graph-Structured Data. arxiv 2015. paper

Mikael Henaff, Joan Bruna, Yann LeCun.
Convolutional Neural Networks on Graphs with Fast Localized Spectral Filtering. NIPS 2016. paper

Michaël Defferrard, Xavier Bresson, Pierre Vandergheynst.
Diffusion-Convolutional Neural Networks. NIPS 2016. paper

James Atwood, Don Towsley.
Gated Graph Sequence Neural Networks. ICLR 2016. paper

Yujia Li, Daniel Tarlow, Marc Brockschmidt, Richard Zemel.
Learning Convolutional Neural Networks for Graphs. ICML 2016. paper

Mathias Niepert, Mohamed Ahmed, Konstantin Kutzkov.
Semantic Object Parsing with Graph LSTM. ECCV 2016. paper

Xiaodan Liang, Xiaohui Shen, Jiashi Feng, Liang Lin, Shuicheng Yan.
Semi-Supervised Classification with Graph Convolutional Networks. ICLR 2017. paper

Thomas N. Kipf, Max Welling.
Inductive Representation Learning on Large Graphs. NIPS 2017. paper

William L. Hamilton, Rex Ying, Jure Leskovec.
Geometric deep learning on graphs and manifolds using mixture model cnns. CVPR 2017. paper

Federico Monti, Davide Boscaini, Jonathan Masci, Emanuele Rodolà, Jan Svoboda, Michael M. Bronstein.
Graph Attention Networks. ICLR 2018. paper

Petar Velickovic, Guillem Cucurull, Arantxa Casanova, Adriana Romero, Pietro Lio, Yoshua Bengio.
Covariant Compositional Networks For Learning Graphs. ICLR 2018. paper

Risi Kondor, Hy Truong Son, Horace Pan, Brandon Anderson, Shubhendu Trivedi.
Graph Partition Neural Networks for Semi-Supervised Classification. ICLR 2018. paper

Renjie Liao, Marc Brockschmidt, Daniel Tarlow, Alexander L. Gaunt, Raquel Urtasun, Richard Zemel.
Inference in Probabilistic Graphical Models by Graph Neural Networks. ICLR Workshop 2018. paper

KiJung Yoon, Renjie Liao, Yuwen Xiong, Lisa Zhang, Ethan Fetaya, Raquel Urtasun, Richard Zemel, Xaq Pitkow.
Structure-Aware Convolutional Neural Networks. NeurIPS 2018. paper

Jianlong Chang, Jie Gu, Lingfeng Wang, Gaofeng Meng, Shiming Xiang, Chunhong Pan.

Bayesian Semi-supervised Learning with Graph Gaussian Processes. NeurIPS 2018. paper

Yin Cheng Ng, Nicolò Colombo, Ricardo Silva.
Adaptive Graph Convolutional Neural Networks. AAAI 2018. paper

Ruoyu Li, Sheng Wang, Feiyun Zhu, Junzhou Huang.
Dual Graph Convolutional Networks for Graph-Based Semi-Supervised Classification. WWW 2018. paper

Chenyi Zhuang, Qiang Ma.
Learning Steady-States of Iterative Algorithms over Graphs. ICML 2018. paper

Hanjun Dai, Zornitsa Kozareva, Bo Dai, Alex Smola, Le Song.
Graph Capsule Convolutional Neural Networks. ICML 2018 Workshop. paper

Saurabh Verma, Zhi-Li Zhang.
Capsule Graph Neural Network. ICLR 2019. paper

Zhang Xinyi, Lihui Chen.
Graph Wavelet Neural Network. ICLR 2019. paper

Bingbing Xu, Huawei Shen, Qi Cao, Yunqi Qiu, Xueqi Cheng.
Deep Graph Infomax. ICLR 2019. paper

Petar Veličković, William Fedus, William L. Hamilton, Pietro Liò, Yoshua Bengio, R Devon Hjelm.
Predict then Propagate: Graph Neural Networks meet Personalized PageRank. ICLR 2019. paper

Johannes Klicpera, Aleksandar Bojchevski, Stephan Günnemann.
LanczosNet: Multi-Scale Deep Graph Convolutional Networks. ICLR 2019. paper

Renjie Liao, Zhizhen Zhao, Raquel Urtasun, Richard Zemel.
Invariant and Equivariant Graph Networks. ICLR 2019. paper

Haggai Maron, Heli Ben-Hamu, Nadav Shamir, Yaron Lipman.
GMNN: Graph Markov Neural Networks. ICML 2019. paper

Meng Qu, Yoshua Bengio, Jian Tang.
Position-aware Graph Neural Networks. ICML 2019. paper

Jiaxuan You, Rex Ying, Jure Leskovec.
Disentangled Graph Convolutional Networks. ICML 2019. paper

Jianxin Ma, Peng Cui, Kun Kuang, Xin Wang, Wenwu Zhu.
Stochastic Blockmodels meet Graph Neural Networks. ICML 2019. paper

Nikhil Mehta, Lawrence Carin, Piyush Rai.
Learning Discrete Structures for Graph Neural Networks. ICML 2019. paper

Luca Franceschi, Mathias Niepert, Massimiliano Pontil, Xiao He.
MixHop: Higher-Order Graph Convolutional Architectures via Sparsified Neighborhood Mixing. ICML 2019. paper

Sami Abu-El-Haija, Bryan Perozzi, Amol Kapoor, Nazanin Alipourfard, Kristina Lerman, Hrayr Harutyunyan, Greg Ver Steeg, Aram Galstyan.
DEMO-Net: Degree-specific Graph Neural Networks for Node and Graph Classification. KDD 2019. paper

Jun Wu, Jingrui He, Jiejun Xu.
Graph Representation Learning via Hard and Channel-Wise Attention Networks. KDD 2019. paper

Hongyang Gao, Shuiwang Ji.
Graph Learning-Convolutional Networks. CVPR 2019. paper

Bo Jiang, Ziyan Zhang, Doudou Lin, Jin Tang.
Data Representation and Learning with Graph Diffusion-Embedding Networks. CVPR 2019. paper

Bo Jiang, Doudou Lin, Jin Tang, Bin Luo.
Label Efficient Semi-Supervised Learning via Graph Filtering. CVPR 2019. paper

Qimai Li, Xiao-Ming Wu, Han Liu, Xiaotong Zhang, Zhichao Guan.
SPAGAN: Shortest Path Graph Attention Network. IJCAI 2019. paper

Yiding Yang, Xinchao Wang, Mingli Song, Junsong Yuan, Dacheng Tao.
Topology Optimization based Graph Convolutional Network. IJCAI 2019. paper

Liang Yang, Zesheng Kang, Xiaochun Cao, Di Jin, Bo Yang, Yuanfang Guo.
Hierarchical Graph Convolutional Networks for Semi-supervised Node Classification. IJCAI 2019. paper

Fenyu Hu, Yanqiao Zhu, Shu Wu, Liang Wang, Tieniu Tan.
Masked Graph Convolutional Network. IJCAI 2019. paper

Liang Yang, Fan Wu, Yingkui Wang, Junhua Gu, Yuanfang Guo.
Dual Self-Paced Graph Convolutional Network: Towards Reducing Attribute Distortions Induced by Topology. IJCAI 2019. paper

Liang Yang, Zhiyang Chen, Junhua Gu, Yuanfang Guo.
Bayesian graph convolutional neural networks for semi-supervised classification. AAAI 2019. paper

Yingxue Zhang, Soumyasundar Pal, Mark Coates, Deniz Üstebay.
GeniePath: Graph Neural Networks with Adaptive Receptive Paths. AAAI 2019. paper

Ziqi Liu, Chaochao Chen, Longfei Li, Jun Zhou, Xiaolong Li, Le Song, Yuan Qi.
Gaussian-Induced Convolution for Graphs. AAAI 2019. paper

Jiatao Jiang, Zhen Cui, Chunyan Xu, Jian Yang.
Fisher-Bures Adversary Graph Convolutional Networks. UAI 2019. paper

Ke Sun, Piotr Koniusz, Zhen Wang.
N-GCN: Multi-scale Graph Convolution for Semi-supervised Node Classification. UAI 2019. paper

Sami Abu-El-Haija, Amol Kapoor, Bryan Perozzi, Joonseok Lee.
Confidence-based Graph Convolutional Networks for Semi-Supervised Learning. AISTATS 2019. paper

Shikhar Vashishth, Prateek Yadav, Manik Bhandari, Partha Talukdar.
Lovasz Convolutional Networks. AISTATS 2019. paper

Prateek Yadav, Madhav Nimishakavi, Naganand Yadati, Shikhar Vashishth, Arun Rajkumar, Partha Talukdar.
Provably Powerful Graph Networks. NeurIPS 2019. paper

Haggai Maron, Heli Ben-Hamu, Hadar Serviansky, Yaron Lipman.
Graph Agreement Models for Semi-Supervised Learning. NeurIPS 2019. paper

Otilia Stretcu, Krishnamurthy Viswanathan, Dana Movshovitz-Attias, Emmanouil Platanios. Sujith Ravi, Andrew Tomkins.
Graph-Based Semi-Supervised Learning with Non-ignorable Non-response. NeurIPS 2019. paper

Fan Zhou, Tengfei Li, Haibo Zhou, Hongtu Zhu, Ye Jieping.
A Flexible Generative Framework for Graph-based Semi-supervised Learning. NeurIPS 2019. paper

Jiaqi Ma, Weijing Tang, Ji Zhu, Qiaozhu Mei.
Semi-Implicit Graph Variational Auto-Encoders. NeurIPS 2019. paper

Arman Hasanzadeh, Ehsan Hajiramezanali, Krishna Narayanan, Nick Duffield, Mingyuan Zhou, Xiaoning Qian.
Hyperbolic Graph Neural Networks. NeurIPS 2019. paper

Qi Liu, Maximilian Nickel, Douwe Kiela.
Hyperbolic Graph Convolutional Neural Networks. NeurIPS 2019. paper

Ines Chami, Zhitao Ying, Christopher Ré, Jure Leskovec.
Graph Neural Tangent Kernel: Fusing Graph Neural Networks with Graph Kernels. NeurIPS 2019. paper

Simon Du, Kangcheng Hou, Russ Salakhutdinov, Barnabas Poczos, Ruosong Wang, Keyulu Xu.
SNEQ: Semi-supervised Attributed Network Embedding with Attention-based Quantisation. AAAI 2020. paper

Tao He, Lianli Gao, Jingkuan Song, Xin Wang, Kejie Huang, Yuan-‐Fang Li.
Going Deep: Graph Convolutional Ladder-Shape Networks. AAAI 2020. paper

Ruiqi Hu, Shirui Pan, Guodong Long, Qinghua Lu, Liming Zhu, Jing Jiang.
Co-GCN for Multi-View Semi-Supervised Learning. AAAI 2020. paper

Shu Li, Wen-‐Tao Li, Wei Wang.
Graph Representation Learning via Ladder Gamma Variational Autoencoders. AAAI 2020. paper

Arindam Sarkar, Nikhil Mehta, Piyush Rai.
GSSNN: Graph Smoothing Splines Neural Networks. AAAI 2020. paper

Shichao Zhu, Lewei Zhou, Shirui Pan, Chuan Zhou, Guiying Yan, Bin Wang.
Effective Decoding in Graph Auto-Encoder using Triadic Closure. AAAI 2020. paper

Han Shi, Haozheng Fan, James T. Kwok.
An Attention-based Graph Neural Network for Heterogeneous Structural Learning. AAAI 2020. paper

Huiting Hong, Hantao Guo, Yucheng Lin, Xiaoqing Yang, Zang Li, Jieping Ye.
Fast and Deep Graph Neural Networks. AAAI 2020. paper

Claudio Gallicchio, Alessio Micheli.
Hypergraph Label Propagation Network. AAAI 2020. paper

Yubo Zhang, Nan Wang, Yufeng Chen, Changqing Zou, Hai Wan, Xibin Zhao, Yue Gao.
Learning Signed Network Embedding via Graph Attention. AAAI 2020. paper

Yu Li, Yuan Tian, Jiawei Zhang, Yi Chang.
GraLSP: Graph Neural Networks with Local Structural Patterns. AAAI 2020. paper

Yilun Jin, Guojie Song, Chuan Shi.
ASAP: Adaptive Structure Aware Pooling for Learning Hierarchical Graph Representations. AAAI 2020. paper

Ekagra Ranjan, Soumya Sanyal, Partha Pratim Talukdar.
Multi‐Stage Self‐Supervised Learning for Graph Convolutional Networks on Graphs with Few Labeled Nodes. AAAI 2020. paper

Ke Sun, Zhouchen Lin, Zhanxing Zhu.
Collaborative Graph Convolutional Networks: Unsupervised Learning Meets Semi-‐Supervised Learning. AAAI 2020. paper

Binyuan Hui, Pengfei Zhu, Qinghua, Hu.
A Multi‐Scale Approach for Graph Link Prediction. AAAI 2020. paper

Lei Cai, Shuiwang Ji.
Adaptive Structural Fingerprints for Graph Attention Networks. ICLR 2020. paper

Kai Zhang, Yaokang Zhu, Jun Wang, Jie Zhang.
Strategies for Pre-training Graph Neural Networks. ICLR 2020. paper

Weihua Hu, Bowen Liu, Joseph Gomes, Marinka Zitnik, Percy Liang, Vijay Pande, Jure Leskovec.
DropEdge: Towards Deep Graph Convolutional Networks on Node Classification. ICLR 2020. paper

Yu Rong, Wenbing Huang, Tingyang Xu, Junzhou Huang.
Directional Message Passing for Molecular Graphs. ICLR 2020. paper

Johannes Klicpera, Janek Groß, Stephan Günnemann.
DeepSphere: a graph-based spherical CNN. ICLR 2020. paper

Michaël Defferrard, Martino Milani, Frédérick Gusset, Nathanaël Perraudin.
Geom-GCN: Geometric Graph Convolutional Networks. ICLR 2020. paper

Hongbin Pei, Bingzhe Wei, Kevin Chen-Chuan Chang, Yu Lei, Bo Yang.
Curvature Graph Network. ICLR 2020. paper

Ze Ye, Kin Sum Liu, Tengfei Ma, Jie Gao, Chao Chen.
Measuring and Improving the Use of Graph Information in Graph Neural Networks. ICLR 2020. paper

Yifan Hou, Jian Zhang, James Cheng, Kaili Ma, Richard T. B. Ma, Hongzhi Chen, Ming-Chang Yang.
Memory-Based Graph Networks. ICLR 2020. paper

Amir Hosein Khasahmadi, Kaveh Hassani, Parsa Moradi, Leo Lee, Quaid Morris.
Pruned Graph Scattering Transforms. ICLR 2020. paper

Vassilis N. Ioannidis, Siheng Chen, Georgios B. Giannakis.
Neural Execution of Graph Algorithms. ICLR 2020. paper

Petar Veličković, Rex Ying, Matilde Padovano, Raia Hadsell, Charles Blundell.
GraphSAINT: Graph Sampling Based Inductive Learning Method. ICLR 2020. paper

Hanqing Zeng, Hongkuan Zhou, Ajitesh Srivastava, Rajgopal Kannan, Viktor Prasanna.
Graph inference learning for semi-supervised classification. ICLR 2020. paper

Chunyan Xu, Zhen Cui, Xiaobin Hong, Tong Zhang, Jian Yang, Wei Liu.
SGAS: Sequential Greedy Architecture Search. CVPR 2020. paper

Guohao Li, Guocheng Qian, Itzel C. Delgadillo, Matthias Müller, Ali Thabet, Bernard Ghanem.
Adaptive Propagation Graph Convolutional Network. IEEE TNNLS 2020. paper

Indro Spinelli, Simone Scardapane, Aurelio Uncini.

Graph Types

DyRep: Learning Representations over Dynamic Graphs. ICLR 2019. paper

Rakshit Trivedi, Mehrdad Farajtabar, Prasenjeet Biswal, Hongyuan Zha.
Hypergraph Neural Networks. AAAI 2019. paper

Yifan Feng, Haoxuan You, Zizhao Zhang, Rongrong Ji, Yue Gao.
Heterogeneous Graph Attention Network. WWW 2019. paper

Xiao Wang, Houye Ji, Chuan Shi, Bai Wang, Peng Cui, P. Yu, Yanfang Ye.
Representation Learning for Attributed Multiplex Heterogeneous Network. KDD 2019. paper

Yukuo Cen, Xu Zou, Jianwei Zhang, Hongxia Yang, Jingren Zhou, Jie Tang.
ActiveHNE: Active Heterogeneous Network Embedding. IJCAI 2019. paper

Xia Chen, Guoxian Yu, Jun Wang, Carlotta Domeniconi, Zhao Li, Xiangliang Zhang.
GCN-LASE: Towards Adequately Incorporating Link Attributes in Graph Convolutional Networks. IJCAI 2019. paper

Ziyao Li, Liang Zhang, Guojie Song.
Dynamic Hypergraph Neural Networks. IJCAI 2019. paper

Jianwen Jiang, Yuxuan Wei, Yifan Feng, Jingxuan Cao, Yue Gao.
Exploiting Interaction Links for Node Classification with Deep Graph Neural Networks. IJCAI 2019. paper

Hogun Park, Jennifer Neville.
Exploiting Edge Features in Graph Neural Networks. CVPR 2019. paper

Liyu Gong, Qiang Cheng.
HyperGCN: A New Method For Training Graph Convolutional Networks on Hypergraphs. NeurIPS 2019. paper

Naganand Yadati, Madhav Nimishakavi, Prateek Yadav, Vikram Nitin, Anand Louis, Partha Talukdar.
Graph Transformer Networks. NeurIPS 2019. paper

Seongjun Yun, Minbyul Jeong, Raehyun Kim, Jaewoo Kang, Hyunwoo Kim.
Recurrent Space-time Graph Neural Networks. NeurIPS 2019. paper

Andrei Nicolicioiu, Iulia Duta, Marius Leordeanu.
EvolveGCN: Evolving Graph Convolutional Networks for Dynamic Graphs. AAAI 2020. paper

Aldo Pareja, Giacomo Domeniconi, Jie Chen, Tengfei Ma, Toyotaro Suzumura, Hiroki Kanezashi, Tim Kaler, Tao B. Schardl, Charles E. Leiserson.
Spatial-Temporal Synchronous Graph Convolutional Networks: A New Framework for Spatial-Temporal Network Data Forecasting. AAAI 2020. paper

Chao Song, Youfang Lin, Shengnan Guo, Huaiyu Wan.
Type-aware Anchor Link Prediction across Heterogeneous Networks based on Graph Attention Network. AAAI 2020. paper

Xiaoxue Li, Yanmin Shang, Yanan Cao, Yangxi Li, Jianlong Tan, Yanbing Liu.
Composition-based Multi-Relational Graph Convolutional Networks. ICLR 2020. paper

Shikhar Vashishth, Soumya Sanyal, Vikram Nitin, Partha Talukdar.
Inductive representation learning on temporal graphs. ICLR 2020. paper

da Xu, chuanwei ruan, evren korpeoglu, sushant kumar, kannan achan.
Hyper-SAGNN: a self-attention based graph neural network for hypergraphs. ICLR 2020. paper

Ruochi Zhang, Yuesong Zou, Jian Ma.
Digraph Inception Convolutional Networks. NeurIPS 2020. paper

Zekun Tong, Yuxuan Liang, Changsheng Sun, Xinke Li, David S. Rosenblum, Andrew Lim.
Subgraph Neural Networks. NeurIPS 2020. paper

Emily Alsentzer, Samuel Finlayson, Michelle Li, Marinka Zitnik.

Pooling Methods

An End-to-End Deep Learning Architecture for Graph Classification. AAAI 2018. paper

Muhan Zhang, Zhicheng Cui, Marion Neumann, Yixin Chen.
Hierarchical Graph Representation Learning with Differentiable Pooling. NeurIPS 2018. paper

Zhitao Ying, Jiaxuan You, Christopher Morris, Xiang Ren, Will Hamilton, Jure Leskovec.
Self-Attention Graph Pooling. ICML 2019. paper

Junhyun Lee, Inyeop Lee, Jaewoo Kang.
Graph U-Nets. ICML 2019. paper

Hongyang Gao, Shuiwang Ji.
Graph Convolutional Networks with EigenPooling. KDD 2019. paper

Yao Ma, Suhang Wang, Charu C. Aggarwal, Jiliang Tang.
Relational Pooling for Graph Representations. ICML 2019. paper

Ryan L. Murphy, Balasubramaniam Srinivasan, Vinayak Rao, Bruno Ribeiro.
Break the Ceiling: Stronger Multi-scale Deep Graph Convolutional Networks. NeurIPS 2019. paper

Sitao Luan, Mingde Zhao, Xiao-Wen Chang, Doina Precup.
Diffusion Improves Graph Learning. NeurIPS 2019. paper

Johannes Klicpera, Stefan Weißenberger, Stephan Günnemann.
Hierarchical Graph Pooling with Structure Learning. AAAI 2020. paper

Zhen Zhang, Jiajun Bu, Martin Ester, Jianfeng Zhang, Chengwei Yao, Zhi Yu, Can Wang.
StructPool: Structured Graph Pooling via Conditional Random Fields. ICLR 2020. paper

Hao Yuan, Shuiwang Ji.
Spectral Clustering with Graph Neural Networks for Graph Pooling. ICML 2020. paper

Filippo Maria Bianchi, Daniele Grattarola, Cesare Alippi.
Accurate Learning of Graph Representations with Graph Multiset Pooling. ICLR 2021. paper

Jinheon Baek, Minki Kang, Sung Ju Hwang.

Analysis

A Comparison between Recursive Neural Networks and Graph Neural Networks. IJCNN 2006. paper

Vincenzo Di Massa, Gabriele Monfardini, Lorenzo Sarti, Franco Scarselli, Marco Maggini, Marco Gori.
Neural networks for relational learning: an experimental comparison. Machine Learning 2011. paper

Werner Uwents, Gabriele Monfardini, Hendrik Blockeel, Marco Gori, Franco Scarselli.
Mean-field theory of graph neural networks in graph partitioning. NeurIPS 2018. paper

Tatsuro Kawamoto, Masashi Tsubaki, Tomoyuki Obuchi.
Representation Learning on Graphs with Jumping Knowledge Networks. ICML 2018. paper

Keyulu Xu, Chengtao Li, Yonglong Tian, Tomohiro Sonobe, Ken-ichi Kawarabayashi, Stefanie Jegelka.
Deeper Insights into Graph Convolutional Networks for Semi-Supervised Learning. AAAI 2018. paper

Qimai Li, Zhichao Han, Xiao-Ming Wu.
How Powerful are Graph Neural Networks? ICLR 2019. paper

Keyulu Xu, Weihua Hu, Jure Leskovec, Stefanie Jegelka.
Stability and Generalization of Graph Convolutional Neural Networks. KDD 2019. paper

Saurabh Verma, Zhi-Li Zhang.
Simplifying Graph Convolutional Networks. ICML 2019. paper

Felix Wu, Tianyi Zhang, Amauri Holanda de Souza Jr., Christopher Fifty, Tao Yu, Kilian Q. Weinberger.
Explainability Methods for Graph Convolutional Neural Networks. CVPR 2019. paper

Phillip E. Pope, Soheil Kolouri, Mohammad Rostami, Charles E. Martin, Heiko Hoffmann.
Can GCNs Go as Deep as CNNs? ICCV 2019. paper

Guohao Li, Matthias Müller, Ali Thabet, Bernard Ghanem.
Weisfeiler and Leman Go Neural: Higher-order Graph Neural Networks. AAAI 2019. paper

Christopher Morris, Martin Ritzert, Matthias Fey, William L. Hamilton, Jan Eric Lenssen, Gaurav Rattan, Martin Grohe.
Understanding Attention and Generalization in Graph Neural Networks. NeurIPS 2019. paper

Boris Knyazev, Graham W. Taylor, Mohamed R. Amer.
GNNExplainer: Generating Explanations for Graph Neural Networks. NeurIPS 2019. paper

Zhitao Ying, Dylan Bourgeois, Jiaxuan You, Marinka Zitnik, Jure Leskovec.
Universal Invariant and Equivariant Graph Neural Networks. NeurIPS 2019. paper

Nicolas Keriven, Gabriel Peyré.
On the equivalence between graph isomorphism testing and function approximation with GNNs. NeurIPS 2019. paper

Zhengdao Chen, Soledad Villar, Lei Chen, Joan Bruna.
Understanding the Representation Power of Graph Neural Networks in Learning Graph Topology. NeurIPS 2019. paper

Nima Dehmamy, Albert-Laszlo Barabasi, Rose Yu.
Graph Neural Networks Exponentially Lose Expressive Power for Node Classification. ICLR 2020. paper

Kenta Oono, Taiji Suzuki.
What graph neural networks cannot learn: depth vs width. ICLR 2020. paper

Andreas Loukas.
The Logical Expressiveness of Graph Neural Networks. ICLR 2020. paper

Pablo Barceló, Egor V. Kostylev, Mikael Monet, Jorge Pérez, Juan Reutter, Juan Pablo Silva.
On the Equivalence between Positional Node Embeddings and Structural Graph Representations. ICLR 2020. paper

Balasubramaniam Srinivasan, Bruno Ribeiro.

Efficiency

Stochastic Training of Graph Convolutional Networks with Variance Reduction. ICML 2018. paper

Jianfei Chen, Jun Zhu, Le Song.
FastGCN: Fast Learning with Graph Convolutional Networks via Importance Sampling. ICLR 2018. paper

Jie Chen, Tengfei Ma, Cao Xiao.
Adaptive Sampling Towards Fast Graph Representation Learning. NeurIPS 2018. paper

Wenbing Huang, Tong Zhang, Yu Rong, Junzhou Huang.
Large-Scale Learnable Graph Convolutional Networks. KDD 2018. paper

Hongyang Gao, Zhengyang Wang, Shuiwang Ji.
Cluster-GCN: An Efficient Algorithm for Training Deep and Large Graph Convolutional Networks. KDD 2019. paper

Wei-Lin Chiang, Xuanqing Liu, Si Si, Yang Li, Samy Bengio, Cho-Jui Hsieh.
A Degeneracy Framework for Scalable Graph Autoencoders. IJCAI 2019. paper

Guillaume Salha, Romain Hennequin, Viet Anh Tran, Michalis Vazirgiannis.
Layer-Dependent Importance Sampling for Training Deep and Large Graph Convolutional Networks. NeurIPS 2019. paper

Difan Zou, Ziniu Hu, Yewen Wang, Song Jiang, Yizhou Sun, Quanquan Gu.
GraphSAINT: Graph Sampling Based Inductive Learning Method. ICLR 2020. paper code

Hanqing Zeng, Hongkuan Zhou, Ajitesh Srivastava, Rajgopal Kannan, Viktor Prasanna.
Scalable Graph Convolutional Network Based Link Prediction on a Distributed Graph Database Server. IEEE CLOUD 2020. paper code

Anuradha Karunarathna, Dinika Senarath, Shalika Madhushanki, Chinthaka Weerakkody, Miyuru Dayarathna, Sanath Jayasena, Toyotaro Suzumura.

Applications

Physics

Discovering objects and their relations from entangled scene representations. ICLR Workshop 2017. paper

David Raposo, Adam Santoro, David Barrett, Razvan Pascanu, Timothy Lillicrap, Peter Battaglia.
A simple neural network module for relational reasoning. NIPS 2017. paper

Adam Santoro, David Raposo, David G.T. Barrett, Mateusz Malinowski, Razvan Pascanu, Peter Battaglia, Timothy Lillicrap.
Interaction Networks for Learning about Objects, Relations and Physics. NIPS 2016. paper

Peter Battaglia, Razvan Pascanu, Matthew Lai, Danilo Rezende, Koray Kavukcuoglu.
Visual Interaction Networks: Learning a Physics Simulator from Video. NIPS 2017. paper

Nicholas Watters, Andrea Tacchetti, Théophane Weber, Razvan Pascanu, Peter Battaglia, Daniel Zoran.
Graph networks as learnable physics engines for inference and control. ICML 2018. paper

Alvaro Sanchez-Gonzalez, Nicolas Heess, Jost Tobias Springenberg, Josh Merel, Martin Riedmiller, Raia Hadsell, Peter Battaglia.
Learning Multiagent Communication with Backpropagation. NIPS 2016. paper

Sainbayar Sukhbaatar, Arthur Szlam, Rob Fergus.
VAIN: Attentional Multi-agent Predictive Modeling. NIPS 2017 paper

Yedid Hoshen.
Neural Relational Inference for Interacting Systems. ICML 2018. paper

Thomas Kipf, Ethan Fetaya, Kuan-Chieh Wang, Max Welling, Richard Zemel.
Graph Element Networks: adaptive, structured computation and memory. ICML 2019. paper

Ferran Alet, Adarsh K. Jeewajee, Maria Bauza, Alberto Rodriguez, Tomas Lozano-Perez, Leslie Pack Kaelbling.
Physics-aware Difference Graph Networks for Sparsely-Observed Dynamics. ICLR 2020. paper

Sungyong Seo, Chuizheng Meng, Yan Liu.

Chemistry and Biology

Convolutional networks on graphs for learning molecular fingerprints. NIPS 2015. paper

David Duvenaud, Dougal Maclaurin, Jorge Aguilera-Iparraguirre, Rafael Gómez-Bombarelli, Timothy Hirzel, Alán Aspuru-Guzik, Ryan P. Adams.
Molecular Graph Convolutions: Moving Beyond Fingerprints. Journal of computer-aided molecular design 2016. paper

Steven Kearnes, Kevin McCloskey, Marc Berndl, Vijay Pande, Patrick Riley.
Protein Interface Prediction using Graph Convolutional Networks. NIPS 2017. paper

Alex Fout, Jonathon Byrd, Basir Shariat, Asa Ben-Hur.
Hybrid Approach of Relation Network and Localized Graph Convolutional Filtering for Breast Cancer Subtype Classification. IJCAI 2018. paper

Sungmin Rhee, Seokjun Seo, Sun Kim.
Modeling polypharmacy side effects with graph convolutional networks. ISMB 2018. paper

Marinka Zitnik, Monica Agrawal, Jure Leskovec.
Spectral Multigraph Networks for Discovering and Fusing Relationships in Molecules. NeurIPS Workshop 2018. paper

Boris Knyazev, Xiao Lin, Mohamed R. Amer, Graham W. Taylor.
MR-GNN: Multi-Resolution and Dual Graph Neural Network for Predicting Structured Entity Interactions. IJCAI 2019. paper

Nuo Xu, Pinghui Wang, Long Chen, Jing Tao, Junzhou Zhao.
Pre-training of Graph Augmented Transformers for Medication Recommendation. IJCAI 2019. paper

Junyuan Shang, Tengfei Ma, Cao Xiao, Jimeng Sun.
GAMENet: Graph Augmented MEmory Networks for Recommending Medication Combination. AAAI 2019. paper

Junyuan Shang, Cao Xiao, Tengfei Ma, Hongyan Li, Jimeng Sun.
AffinityNet: semi-supervised few-shot learning for disease type prediction. AAAI 2019. paper

Tianle Ma, Aidong Zhang.
Graph Transformation Policy Network for Chemical Reaction Prediction. KDD 2019. paper

Kien Do, Truyen Tran, Svetha Venkatesh.
Functional Transparency for Structured Data: a Game-Theoretic Approach. ICML 2019. paper

Guang-He Lee, Wengong Jin, David Alvarez-Melis, Tommi S. Jaakkola.
Learning Multimodal Graph-to-Graph Translation for Molecular Optimization. ICLR 2019. paper

Wengong Jin, Kevin Yang, Regina Barzilay, Tommi Jaakkola.
A Generative Model For Electron Paths. ICLR 2019. paper

John Bradshaw, Matt J. Kusner, Brooks Paige, Marwin H. S. Segler, José Miguel Hernández-Lobato.
Retrosynthesis Prediction with Conditional Graph Logic Network. NeurIPS 2019. paper

Hanjun Dai, Chengtao Li, Connor Coley, Bo Dai, Le Song.
Learning the Graphical Structure of Electronic Health Records with Graph Convolutional Transformer. AAAI 2020. paper

Edward Choi, Zhen Xu, Yujia Li, Michael W. Dusenberry, Gerardo Flores, Yuan Xue, Andrew M. Dai.

Knowledge Graph

Modeling Relational Data with Graph Convolutional Networks. ESWC 2018. paper

Michael Schlichtkrull, Thomas N. Kipf, Peter Bloem, Rianne van den Berg, Ivan Titov, Max Welling.
Cross-lingual Knowledge Graph Alignment via Graph Convolutional Networks. EMNLP 2018. paper

Zhichun Wang, Qingsong Lv, Xiaohan Lan, Yu Zhang.
Representation learning for visual-relational knowledge graphs. arxiv 2017. paper

Daniel Oñoro-Rubio, Mathias Niepert, Alberto García-Durán, Roberto González, Roberto J. López-Sastre.
End-to-end Structure-Aware Convolutional Networks for Knowledge Base Completion. AAAI 2019. paper

Chao Shang, Yun Tang, Jing Huang, Jinbo Bi, Xiaodong He, Bowen Zhou.
Knowledge Transfer for Out-of-Knowledge-Base Entities : A Graph Neural Network Approach. IJCAI 2017. paper

Takuo Hamaguchi, Hidekazu Oiwa, Masashi Shimbo, Yuji Matsumoto.
Logic Attention Based Neighborhood Aggregation for Inductive Knowledge Graph Embedding. AAAI 2019. paper

Peifeng Wang, Jialong Han, Chenliang Li, Rong Pan.
Dynamic Graph Generation Network: Generating Relational Knowledge from Diagrams. CVPR 2018. paper

Haoyu Wang, Defu Lian, Yong Ge.
Estimating Node Importance in Knowledge Graphs Using Graph Neural Networks. KDD 2019. paper

Namyong Park, Andrey Kan, Xin Luna Dong, Tong Zhao, Christos Faloutsos.
OAG: Toward Linking Large-scale Heterogeneous Entity Graphs. KDD 2019. paper

Fanjin Zhang, Xiao Liu, Jie Tang, Yuxiao Dong, Peiran Yao, Jie Zhang, Xiaotao Gu, Yan Wang, Bin Shao, Rui Li, Kuansan Wang.
Learning Attention-based Embeddings for Relation Prediction in Knowledge Graphs. ACL 2019. paper

Deepak Nathani, Jatin Chauhan, Charu Sharma, Manohar Kaul.
Cross-lingual Knowledge Graph Alignment via Graph Matching Neural Network. ACL 2019. paper

Kun Xu, Mo Yu, Yansong Feng, Yan Song, Zhiguo Wang, Dong Yu.
Multi-relational Poincaré Graph Embeddings. NeurIPS 2019. paper

Ivana Balazevic, Carl Allen, Timothy Hospedales.
Dynamically Pruned Message Passing Networks for Large-scale Knowledge Graph Reasoning. ICLR 2020. paper

Xiaoran Xu, Wei Feng, Yunsheng Jiang, Xiaohui Xie, Zhiqing Sun, Zhi-Hong Deng.
Efficient Probabilistic Logic Reasoning with Graph Neural Networks. ICLR 2020. paper

Yuyu Zhang, Xinshi Chen, Yuan Yang, Arun Ramamurthy, Bo Li, Yuan Qi, Le Song.

Recommender Systems

Graph Convolutional Neural Networks for Web-Scale Recommender Systems. KDD 2018. paper

Rex Ying, Ruining He, Kaifeng Chen, Pong Eksombatchai, William L. Hamilton, Jure Leskovec.
Geometric Matrix Completion with Recurrent Multi-Graph Neural Networks. NIPS 2017. paper

Federico Monti, Michael M. Bronstein, Xavier Bresson.
Graph Convolutional Matrix Completion. 2017. paper

Rianne van den Berg, Thomas N. Kipf, Max Welling.
STAR-GCN: Stacked and Reconstructed Graph Convolutional Networks for Recommender Systems. IJCAI 2019. paper

Jiani Zhang, Xingjian Shi, Shenglin Zhao, Irwin King.
Binarized Collaborative Filtering with Distilling Graph Convolutional Networks. IJCAI 2019. paper

Haoyu Wang, Defu Lian, Yong Ge.
Graph Contextualized Self-Attention Network for Session-based Recommendation. IJCAI 2019. paper

Chengfeng Xu, Pengpeng Zhao, Yanchi Liu, Victor S. Sheng, Jiajie Xu, Fuzhen Zhuang, Junhua Fang, Xiaofang Zhou.
Session-based Recommendation with Graph Neural Networks. AAAI 2019. paper

Shu Wu, Yuyuan Tang, Yanqiao Zhu, Liang Wang, Xing Xie, Tieniu Tan.
Geometric Hawkes Processes with Graph Convolutional Recurrent Neural Networks. AAAI 2019. paper

Jin Shang, Mingxuan Sun.
Knowledge-aware Graph Neural Networks with Label Smoothness Regularization for Recommender Systems. KDD 2019. paper

Hongwei Wang, Fuzheng Zhang, Mengdi Zhang, Jure Leskovec, Miao Zhao, Wenjie Li, Zhongyuan Wang.
Exact-K Recommendation via Maximal Clique Optimization. KDD 2019. paper

Yu Gong, Yu Zhu, Lu Duan, Qingwen Liu, Ziyu Guan, Fei Sun, Wenwu Ou, Kenny Q. Zhu.
KGAT: Knowledge Graph Attention Network for Recommendation. KDD 2019. paper

Xiang Wang, Xiangnan He, Yixin Cao, Meng Liu, Tat-Seng Chua.
Knowledge Graph Convolutional Networks for Recommender Systems. WWW 2019. paper

Hongwei Wang, Miao Zhao, Xing Xie, Wenjie Li, Minyi Guo.
Dual Graph Attention Networks for Deep Latent Representation of Multifaceted Social Effects in Recommender Systems. WWW 2019. paper

Qitian Wu, Hengrui Zhang, Xiaofeng Gao, Peng He, Paul Weng, Han Gao, Guihai Chen.
Graph Neural Networks for Social Recommendation. WWW 2019. paper

Wenqi Fan, Yao Ma, Qing Li, Yuan He, Eric Zhao, Jiliang Tang, Dawei Yin.
Memory Augmented Graph Neural Networks for Sequential Recommendation. AAAI 2020. paper

Chen Ma, Liheng Ma, Yingxue Zhang, Jianing Sun, Xue Liu, Mark Coates.
Revisiting Graph based Collaborative Filtering: A Linear Residual Graph Convolutional Network Approach. AAAI 2020. paper

Lei Chen, Le Wu, Richang Hong, Kun Zhang, Meng Wang.
Inductive Matrix Completion Based on Graph Neural Networks. ICLR 2020. paper

Muhan Zhang, Yixin Chen.

Computer Vision

Graph Neural Networks for Object Localization. ECAI 2006. paper

Gabriele Monfardini, Vincenzo Di Massa, Franco Scarselli, Marco Gori.
Learning Human-Object Interactions by Graph Parsing Neural Networks. ECCV 2018. paper

Siyuan Qi, Wenguan Wang, Baoxiong Jia, Jianbing Shen, Song-Chun Zhu.
Learning Conditioned Graph Structures for Interpretable Visual Question Answering. NeurIPS 2018. paper

Will Norcliffe-Brown, Efstathios Vafeias, Sarah Parisot.
Symbolic Graph Reasoning Meets Convolutions. NeurIPS 2018. paper

Xiaodan Liang, Zhiting Hu, Hao Zhang, Liang Lin, Eric P. Xing.
Out of the Box: Reasoning with Graph Convolution Nets for Factual Visual Question Answering. NeurIPS 2018. paper

Medhini Narasimhan, Svetlana Lazebnik, Alexander Schwing.
Structural-RNN: Deep Learning on Spatio-Temporal Graphs. CVPR 2016. paper

Ashesh Jain, Amir R. Zamir, Silvio Savarese, Ashutosh Saxena.
Relation Networks for Object Detection. CVPR 2018. paper

Han Hu, Jiayuan Gu, Zheng Zhang, Jifeng Dai, Yichen Wei.
Learning Region features for Object Detection. ECCV 2018. paper

Jiayuan Gu, Han Hu, Liwei Wang, Yichen Wei, Jifeng Dai.
The More You Know: Using Knowledge Graphs for Image Classification. CVPR 2017. paper

Kenneth Marino, Ruslan Salakhutdinov, Abhinav Gupta.
Understanding Kin Relationships in a Photo. TMM 2012. paper

Siyu Xia, Ming Shao, Jiebo Luo, Yun Fu.
Graph-Structured Representations for Visual Question Answering. CVPR 2017. paper

Damien Teney, Lingqiao Liu, Anton van den Hengel.
Spatial Temporal Graph Convolutional Networks for Skeleton-Based Action Recognition. AAAI 2018. paper

Sijie Yan, Yuanjun Xiong, Dahua Lin.
Dynamic Graph CNN for Learning on Point Clouds. CVPR 2018. paper

Yue Wang, Yongbin Sun, Ziwei Liu, Sanjay E. Sarma, Michael M. Bronstein, Justin M. Solomon.
PointNet: Deep Learning on Point Sets for 3D Classification and Segmentation. CVPR 2018. paper

Charles R. Qi, Hao Su, Kaichun Mo, Leonidas J. Guibas.
3D Graph Neural Networks for RGBD Semantic Segmentation. CVPR 2017. paper

Xiaojuan Qi, Renjie Liao, Jiaya Jia, Sanja Fidler, Raquel Urtasun.
Iterative Visual Reasoning Beyond Convolutions. CVPR 2018. paper

Xinlei Chen, Li-Jia Li, Li Fei-Fei, Abhinav Gupta.
Dynamic Edge-Conditioned Filters in Convolutional Neural Networks on Graphs. CVPR 2017. paper

Martin Simonovsky, Nikos Komodakis.
Situation Recognition with Graph Neural Networks. ICCV 2017. paper

Ruiyu Li, Makarand Tapaswi, Renjie Liao, Jiaya Jia, Raquel Urtasun, Sanja Fidler.
Deep Reasoning with Knowledge Graph for Social Relationship Understanding. IJCAI 2018. paper

Zhouxia Wang, Tianshui Chen, Jimmy Ren, Weihao Yu, Hui Cheng, Liang Lin.
I Know the Relationships: Zero-Shot Action Recognition via Two-Stream Graph Convolutional Networks and Knowledge Graphs. AAAI 2019. paper

Junyu Gao, Tianzhu Zhang, Changsheng Xu.

Graph CNNs with Motif and Variable Temporal Block for Skeleton-based Action Recognition. AAAI 2019. paper

Yu-Hui Wen, Lin Gao, Hongbo Fu, Fang-Lue Zhang, Shihong Xia.
Multi-Label Image Recognition with Graph Convolutional Networks. CVPR 2019. paper

Zhao-Min Chen, Xiu-Shen Wei, Peng Wang, Yanwen Guo.
Spatial-Aware Graph Relation Network for Large-Scale Object Detection. CVPR 2019. paper

Hang Xu, Chenhan Jiang, Xiaodan Liang, Zhenguo Li.
GCAN: Graph Convolutional Adversarial Network for Unsupervised Domain Adaptation. CVPR 2019. paper

Xinhong Ma, Tianzhu Zhang, Changsheng Xu.
Mind Your Neighbours: Image Annotation With Metadata Neighbourhood Graph Co-Attention Networks. CVPR 2019. paper

Junjie Zhang, Qi Wu, Jian Zhang, Chunhua Shen, Jianfeng Lu.
Attentive Relational Networks for Mapping Images to Scene Graphs. CVPR 2019. paper

Mengshi Qi, Weijian Li, Zhengyuan Yang, Yunhong Wang, Jiebo Luo.
Knowledge-Embedded Routing Network for Scene Graph Generation. CVPR 2019. paper

Tianshui Chen, Weihao Yu, Riquan Chen, Liang Lin.
Auto-Encoding Scene Graphs for Image Captioning. CVPR 2019. paper

Xu Yang, Kaihua Tang, Hanwang Zhang, Jianfei Cai.
Learning to Cluster Faces on an Affinity Graph. CVPR 2019. paper

Lei Yang, Xiaohang Zhan, Dapeng Chen, Junjie Yan, Chen Change Loy, Dahua Lin.
Learning a Deep ConvNet for Multi-label Classification with Partial Labels. CVPR 2019. paper

Thibaut Durand, Nazanin Mehrasa, Greg Mori.
Graph Convolutional Label Noise Cleaner: Train a Plug-and-play Action Classifier for Anomaly Detection. CVPR 2019. paper

Jia-Xing Zhong, Nannan Li, Weijie Kong, Shan Liu, Thomas H. Li, Ge Li.
Learning Actor Relation Graphs for Group Activity Recognition. CVPR 2019. paper

Jianchao Wu, Limin Wang, Li Wang, Jie Guo, Gangshan Wu.
ABC: A Big CAD Model Dataset For Geometric Deep Learning. CVPR 2019. paper

Sebastian Koch, Albert Matveev, Zhongshi Jiang, Francis Williams, Alexey Artemov, Evgeny Burnaev, Marc Alexa, Denis Zorin, Daniele Panozzo.
Neighbourhood Watch: Referring Expression Comprehension via Language-guided Graph Attention Networks. CVPR 2019. paper

Peng Wang, Qi Wu, Jiewei Cao, Chunhua Shen, Lianli Gao, Anton van den Hengel.
Graph-Based Global Reasoning Networks. CVPR 2019. paper

Yunpeng Chen, Marcus Rohrbach, Zhicheng Yan, Shuicheng Yan, Jiashi Feng, Yannis Kalantidis.
Linkage Based Face Clustering via Graph Convolution Network. CVPR 2019. paper

Zhongdao Wang, Liang Zheng, Yali Li, Shengjin Wang.
Fast Interactive Object Annotation with Curve-GCN. CVPR 2019. paper

Huan Ling, Jun Gao, Amlan Kar, Wenzheng Chen, Sanja Fidler.
Semantic Graph Convolutional Networks for 3D Human Pose Regression. CVPR 2019. paper

Long Zhao, Xi Peng, Yu Tian, Mubbasir Kapadia, Dimitris N. Metaxas.
Neural Task Graphs: Generalizing to Unseen Tasks from a Single Video Demonstration. CVPR 2019. paper

De-An Huang, Suraj Nair, Danfei Xu, Yuke Zhu, Animesh Garg, Li Fei-Fei, Silvio Savarese, Juan Carlos Niebles.
Graphonomy: Universal Human Parsing via Graph Transfer Learning. CVPR 2019. paper

Ke Gong, Yiming Gao, Xiaodan Liang, Xiaohui Shen, Meng Wang, Liang Lin.
Learning Context Graph for Person Search. CVPR 2019. paper

Yichao Yan, Qiang Zhang, Bingbing Ni, Wendong Zhang, Minghao Xu, Xiaokang Yang.
Occlusion-Net: 2D/3D Occluded Keypoint Localization Using Graph Networks. CVPR 2019. paper

N. Dinesh Reddy, Minh Vo, Srinivasa G. Narasimhan.
MAN: Moment Alignment Network for Natural Language Moment Retrieval via Iterative Graph Adjustment. CVPR 2019. paper

Da Zhang, Xiyang Dai, Xin Wang, Yuan-Fang Wang, Larry S. Davis.
Context-Aware Visual Compatibility Prediction. CVPR 2019. paper

Guillem Cucurull, Perouz Taslakian, David Vazquez.
Graph Attention Convolution for Point Cloud Semantic Segmentation. CVPR 2019. paper

Lei Wang, Yuchun Huang, Yaolin Hou, Shenman Zhang, Jie Shan.
An Attention Enhanced Graph Convolutional LSTM Network for Skeleton-Based Action Recognition. CVPR 2019. paper

Chenyang Si, Wentao Chen, Wei Wang, Liang Wang, Tieniu Tan.
Actional-Structural Graph Convolutional Networks for Skeleton-based Action Recognition. CVPR 2019. paper

Maosen Li, Siheng Chen, Xu Chen, Ya Zhang, Yanfeng Wang, Qi Tian.
Graph Convolutional Tracking. CVPR 2019. paper

Junyu Gao, Tianzhu Zhang, Changsheng Xu.
Two-Stream Adaptive Graph Convolutional Networks for Skeleton-Based Action Recognition. CVPR 2019. paper

Lei Shi, Yifan Zhang, Jian Cheng, Hanqing Lu.
Skeleton-Based Action Recognition With Directed Graph Neural Networks. CVPR 2019. paper

Lei Shi, Yifan Zhang, Jian Cheng, Hanqing Lu.
Neural Module Networks. CVPR 2016. paper

Jacob Andreas, Marcus Rohrbach, Trevor Darrell, Dan Klein.
LatentGNN: Learning Efficient Non-local Relations for Visual Recognition. ICML 2019. paper

Songyang Zhang, Shipeng Yan, Xuming He.
Graph Convolutional Gaussian Processes. ICML 2019. paper

Ian Walker, Ben Glocker.
GEOMetrics: Exploiting Geometric Structure for Graph-Encoded Objects. ICML 2019. paper

Edward J. Smith, Scott Fujimoto, Adriana Romero, David Meger.
Learning Cross‐modal Context Graph Networks for Visual Grounding. AAAI 2020. paper

Yongfei Liu, Bo Wan, Xiaodan Zhu, Xuming He.
Zero‐Shot Sketch-based Image Retrieval via Graph Convolution Network. AAAI 2020. paper

Zhaolong Zhang, Yuejie Zhang, Rui Feng, Tao Zhang, Weiguo Fan.
Hybrid Graph Neural Networks for Crowd Counting. AAAI 2020. paper

Ao Luo, Fan Yang, Xin Li, Dong Nie, Zhicheng Jiao, Shangchen Zhou, Hong Cheng.
Learning Graph Convolutional Network for Skeleton-‐based Human Action Recognition by Neural Searching. AAAI 2020. paper

Wei Peng, Xiaopeng Hong, Haoyu Chen, Guoying Zhao.
STEP: Spatial Temporal Graph Convolutional Networks for Emotion Perception from Gaits. AAAI 2020. paper

Uttaran Bhattacharya, Trisha Mittal, Rohan Chandra, Tanmay Randhavane, Aniket Bera, Dinesh Manocha.
Relation‐Aware Pedestrian Attribute Recognition with Graph Convolutional Networks. AAAI 2020. paper

Zichang Tan, Yang Yang, Jun Wan, Stan Li.
Deep Generative Probabilistic Graph Neural Networks for Scene Graph Generation. AAAI 2020. paper

Mahmoud Khademi, Oliver Schulte.
Zero-‐shot Ingredient Recognition by Multi-‐Relational Graph Convolutional Network. AAAI 2020. paper

Jingjing Chen, Liang-Ming Pan, Zhi-Peng Wei, Xiang Wang, Chong-Wah Ngo,Tat-Seng Chua.
Location-aware Graph Convolutional Networks for Video Question Answering. AAAI 2020. paper

Deng Huang, Peihao Chen, Runhao Zeng, Qing Du, Mingkui Tan, Chuang Gan.
Facial Action Unit Intensity Estimation via Semantic Correspondence Learning with Dynamic Graph Convolution. AAAI 2020. paper

Fan Yingruo, Jacqueline C.K. Lam, Victor Li.
Reasoning with Heterogeneous Graph Alignment for Video Question Answering. AAAI 2020. paper

Pin Jiang, Yahong Han.
Multi-Label Classification with Label Graph Superimposing. AAAI 2020. paper

Ya Wang, Dongliang He, Fu Li, Xiang Long, Zhichao Zhou, Jinwen Ma, Shilei Wen.
Part-Level Graph Convolutional Network for Skeleton-Based Action Recognition. AAAI 2020. paper

Linjiang Huang, Yan Huang, Wanli Ouyang, Liang Wang.
SOGNet: Scene Overlap Graph Network for Panoptic Segmentation. AAAI 2020. paper

Yibo Yang, Hongyang Li, Xia Li, Qijie Zhao, Jianlong Wu, Zhouchen Lin.
Universal-RCNN: Universal Object Detector via Transferable Graph R-CNN. AAAI 2020. paper

Hang Xu, Linpu Fang, Xiaodan Liang, Wenxiong Kang, Zhenguo Li.
Abstract Diagrammatic Reasoning with Multiplex Graph Networks. ICLR 2020. paper

Duo Wang, Mateja Jamnik, Pietro Lio.

Natural Language Processing

Conversation Modeling on Reddit using a Graph-Structured LSTM. TACL 2018. paper

Vicky Zayats, Mari Ostendorf.
Learning Graphical State Transitions. ICLR 2017. paper

Daniel D. Johnson.
Multiple Events Extraction via Attention-based Graph Information Aggregation. EMNLP 2018. paper

Xiao Liu, Zhunchen Luo, Heyan Huang.
Recurrent Relational Networks. NeurIPS 2018. paper

Rasmus Palm, Ulrich Paquet, Ole Winther.
Improved Semantic Representations From Tree-Structured Long Short-Term Memory Networks. ACL 2015. paper

Kai Sheng Tai, Richard Socher, Christopher D. Manning.
Encoding Sentences with Graph Convolutional Networks for Semantic Role Labeling. EMNLP 2017. paper

Diego Marcheggiani, Ivan Titov.
Graph Convolutional Networks with Argument-Aware Pooling for Event Detection. AAAI 2018. paper

Thien Huu Nguyen, Ralph Grishman.
Exploiting Semantics in Neural Machine Translation with Graph Convolutional Networks. NAACL 2018. paper

Diego Marcheggiani, Joost Bastings, Ivan Titov.
Exploring Graph-structured Passage Representation for Multi-hop Reading Comprehension with Graph Neural Networks. 2018. paper

Linfeng Song, Zhiguo Wang, Mo Yu, Yue Zhang, Radu Florian, Daniel Gildea.
Graph Convolution over Pruned Dependency Trees Improves Relation Extraction. EMNLP 2018. paper

Yuhao Zhang, Peng Qi, Christopher D. Manning.
N-ary relation extraction using graph state LSTM. EMNLP 18. paper

Linfeng Song, Yue Zhang, Zhiguo Wang, Daniel Gildea.
A Graph-to-Sequence Model for AMR-to-Text Generation. ACL 2018. paper

Linfeng Song, Yue Zhang, Zhiguo Wang, Daniel Gildea.
Graph-to-Sequence Learning using Gated Graph Neural Networks. ACL 2018. paper

Daniel Beck, Gholamreza Haffari, Trevor Cohn.
Cross-Sentence N-ary Relation Extraction with Graph LSTMs. TACL. paper

Nanyun Peng, Hoifung Poon, Chris Quirk, Kristina Toutanova, Wen-tau Yih.
Sentence-State LSTM for Text Representation. ACL 2018. paper

Yue Zhang, Qi Liu, Linfeng Song.
End-to-End Relation Extraction using LSTMs on Sequences and Tree Structures. ACL 2016. paper

Makoto Miwa, Mohit Bansal.
Graph Convolutional Encoders for Syntax-aware Neural Machine Translation. EMNLP 2017. paper

Joost Bastings, Ivan Titov, Wilker Aziz, Diego Marcheggiani, Khalil Sima'an.
Semi-supervised User Geolocation via Graph Convolutional Networks. ACL 2018. paper

Afshin Rahimi, Trevor Cohn, Timothy Baldwin.
Modeling Semantics with Gated Graph Neural Networks for Knowledge Base Question Answering. COLING 2018. paper

Daniil Sorokin, Iryna Gurevych.
Graph Convolutional Networks for Text Classification. AAAI 2019. paper

Liang Yao, Chengsheng Mao, Yuan Luo.

Constructing Narrative Event Evolutionary Graph for Script Event Prediction. IJCAI 2018. paper

Zhongyang Li, Xiao Ding, Ting Liu.
Incorporating Syntactic and Semantic Information in Word Embeddings using Graph Convolutional Networks. ACL 2019. paper

Shikhar Vashishth, Manik Bhandari, Prateek Yadav, Piyush Rai, Chiranjib Bhattacharyya, Partha Talukdar
PaperRobot: Incremental Draft Generation of Scientific Ideas. ACL 2019. paper

Qingyun Wang, Lifu Huang, Zhiying Jiang, Kevin Knight, Heng Ji, Mohit Bansal, Yi Luan.
Inter-sentence Relation Extraction with Document-level Graph Convolutional Neural Network. ACL 2019. paper

Sunil Kumar Sahu, Fenia Christopoulou, Makoto Miwa, Sophia Ananiadou.
Textbook Question Answering with Multi-modal Context Graph Understanding and Self-supervised Open-set Comprehension. ACL 2019. paper

Daesik Kim, Seonhoon Kim, Nojun Kwak.
Multi-hop Reading Comprehension across Multiple Documents by Reasoning over Heterogeneous Graphs. ACL 2019. paper

Ming Tu, Guangtao Wang, Jing Huang, Yun Tang, Xiaodong He, Bowen Zhou.
Dynamically Fused Graph Network for Multi-hop Reasoning. ACL 2019. paper

Yunxuan Xiao, Yanru Qu, Lin Qiu, Hao Zhou, Lei Li, Weinan Zhang, Yong Yu.
Cognitive Graph for Multi-Hop Reading Comprehension at Scale. ACL 2019. paper

Ming Ding, Chang Zhou, Qibin Chen, Hongxia Yang, Jie Tang.
Joint Type Inference on Entities and Relations via Graph Convolutional Networks. ACL 2019. paper

Changzhi Sun, Yeyun Gong, Yuanbin Wu, Ming Gong, Daxing Jiang, Man Lan, Shiliang Sun1, Nan Duan.
Attention Guided Graph Convolutional Networks for Relation Extraction. ACL 2019. paper

Zhijiang Guo, Yan Zhang, Wei Lu.
GraphRel: Modeling Text as Relational Graphs for Joint Entity and Relation Extraction. ACL 2019. paper

Tsu-Jui Fu, Peng-Hsuan Li, Wei-Yun Ma.
Graph Neural Networks with Generated Parameters for Relation Extraction. ACL 2019. paper

Hao Zhu, Yankai Lin, Zhiyuan Liu, Jie Fu, Tat-seng Chua, Maosong Sun.
Generating Logical Forms from Graph Representations of Text and Entities. ACL 2019. paper

Peter Shaw, Philip Massey, Angelica Chen, Francesco Piccinno, Yasemin Altun.
Matching Article Pairs with Graphical Decomposition and Convolutions. ACL 2019. paper

Bang Liu, Di Niu, Haojie Wei, Jinghong Lin, Yancheng He, Kunfeng Lai, Yu Xu.
Representing Schema Structure with Graph Neural Networks for Text-to-SQL Parsing. ACL 2019. paper

Ben Bogin, Matt Gardner, Jonathan Berant.
Coherent Comment Generation for Chinese Articles with a Graph-to-Sequence Model. ACL 2019. paper

Wei Li, Jingjing Xu, Yancheng He, Shengli Yan, Yunfang Wu, Xu sun.
GEAR: Graph-based Evidence Aggregating and Reasoning for Fact Verification. ACL 2019. paper

Jie Zhou, Xu Han, Cheng Yang, Zhiyuan Liu, Lifeng Wang, Changcheng Li, Maosong Sun.
Look Again at the Syntax: Relational Graph Convolutional Network for Gendered Ambiguous Pronoun Resolution. ACL 2019. paper

Yinchuan Xu, Junlin Yang.
Structured Neural Summarization. ICLR 2019. paper

Patrick Fernandes, Miltiadis Allamanis, Marc Brockschmidt.
Long-tail Relation Extraction via Knowledge Graph Embeddings and Graph Convolution Networks. NAACL 2019. paper

Ningyu Zhang, Shumin Deng, Zhanlin Sun, Guanying Wang, Xi Chen, Wei Zhang, Huajun Chen.
Text Generation from Knowledge Graphs with Graph Transformers. NAACL 2019. paper

Rik Koncel-Kedziorski, Dhanush Bekal, Yi Luan, Mirella Lapata, Hannaneh Hajishirzi.
Question Answering by Reasoning Across Documents with Graph Convolutional Networks. NAACL 2019. paper

Nicola De Cao, Wilker Aziz, Ivan Titov.
BAG: Bi-directional Attention Entity Graph Convolutional Network for Multi-hop Reasoning Question Answering. NAACL 2019. paper

Yu Cao, Meng Fang, Dacheng Tao.
GraphIE: A Graph-Based Framework for Information Extraction. NAACL 2019. paper

Yujie Qian, Enrico Santus, Zhijing Jin, Jiang Guo, Regina Barzilay.
Graph Convolution for Multimodal Information Extraction from Visually Rich Documents. NAACL 2019. paper

Xiaojing Liu, Feiyu Gao, Qiong Zhang, Huasha Zhao.
Structural Neural Encoders for AMR-to-text Generation. NAACL 2019. paper

Marco Damonte, Shay B. Cohen.
Abusive Language Detection with Graph Convolutional Networks. NAACL 2019. paper

Pushkar Mishra, Marco Del Tredici, Helen Yannakoudakis, Ekaterina Shutova.
Learning Graph Pooling and Hybrid Convolutional Operations for Text Representations. WWW 2019. paper

Hongyang Gao, Yongjun Chen, Shuiwang Ji.
Graph‐based Transformer with Cross-candidate Verification for Semantic Parsing. AAAI 2020. paper

Bo Shao, Yeyun Gong, Weizhen Qi, Guihong Cao, Jianshu Ji, Xiaola Lin.
Efficient Multi-Person Pose Estimation with Provable Guarantees. AAAI 2020. paper

Shaofei Wang, Konrad Paul Kording, Julian Yarkony.
Graph Transformer for Graph-to-Sequence Learning. AAAI 2020. paper

Deng Cai, Wai Lam.
Multi-‐label Patent Categorization with Non-‐local Attention-‐based Graph Convolutional Network. AAAI 2020. paper

Pingjie Tang, Meng Jiang, Bryan (Ning) Xia, Jed Pitera, Jeff Welser, Nitesh Chawla.
Multi-task Learning for Metaphor Detection with Graph Convolutional Neural Networks and Word Sense Disambiguation. AAAI 2020. paper

Duong Minh Le, My Thai and Thien Huu Nguyen.
Schema-Guided Multi-Domain Dialogue State Tracking with Graph Attention Neural Networks. AAAI 2020. paper

Lu Chen, Boer Lv, Chi Wang, Su Zhu, Bowen Tan, Kai Yu.
GraphER: Token-Centric Entity Resolution with Graph Convolutional Neural Networks. AAAI 2020. paper

Bing Li, Wei Wang, Yifang Sun, Linhan Zhang, Muhammad Asif Ali, Yi Wang.
CFGNN:Cross Flow Graph Neural Networks for Question Answering on Complex Tables. AAAI 2020. paper

Xuanyu Zhang.

Generation

Graph Convolutional Policy Network for Goal-Directed Molecular Graph Generation. NeurIPS 2018. paper

Jiaxuan You, Bowen Liu, Rex Ying, Vijay Pande, Jure Leskovec.
Constrained Generation of Semantically Valid Graphs via Regularizing Variational Autoencoders. NeurIPS 2018. paper

Tengfei Ma, Jie Chen, Cao Xiao.
Learning deep generative models of graphs. ICLR Workshop 2018. paper

Yujia Li, Oriol Vinyals, Chris Dyer, Razvan Pascanu, Peter Battaglia.
MolGAN: An implicit generative model for small molecular graphs. 2018. paper

Nicola De Cao, Thomas Kipf.
GraphRNN: Generating Realistic Graphs with Deep Auto-regressive Models. ICML 2018. paper

Jiaxuan You, Rex Ying, Xiang Ren, William L. Hamilton, Jure Leskovec.
NetGAN: Generating Graphs via Random Walks. ICML 2018. paper

Aleksandar Bojchevski, Oleksandr Shchur, Daniel Zügner, Stephan Günnemann.
Graphite: Iterative Generative Modeling of Graphs. ICML 2019. paper

Aditya Grover, Aaron Zweig, Stefano Ermon.
Generative Code Modeling with Graphs. ICLR 2019. paper

Marc Brockschmidt, Miltiadis Allamanis, Alexander L. Gaunt, Oleksandr Polozov.
Efficient Graph Generation with Graph Recurrent Attention Networks. NeurIPS 2019. paper

Renjie Liao, Yujia Li, Yang Song, Shenlong Wang, Will Hamilton, David Duvenaud, Raquel Urtasun, Richard Zemel.
Graph Normalizing Flows. NeurIPS 2019. paper

Jenny Liu, Aviral Kumar, Jimmy Ba, Jamie Kiros, Kevin Swersky.
Conditional Structure Generation through Graph Variational Generative Adversarial Nets. NeurIPS 2019. paper

Carl Yang, Peiye Zhuang, Wenhan Shi, Alan Luu, Pan Li.
GraphAF: a Flow-based Autoregressive Model for Molecular Graph Generation. ICLR 2020. paper

Chence Shi, Minkai Xu, Zhaocheng Zhu, Weinan Zhang, Ming Zhang, Jian Tang.

Combinatorial Optimization

Combinatorial Optimization with Graph Convolutional Networks and Guided Tree Search. NeurIPS 2018. paper

Zhuwen Li, Qifeng Chen, Vladlen Koltun.
Learning a SAT Solver from Single-Bit Supervision. ICLR 2019. paper

Daniel Selsam, Matthew Lamm, Benedikt Bünz, Percy Liang, Leonardo de Moura, David L. Dill.
A Note on Learning Algorithms for Quadratic Assignment with Graph Neural Networks. PADL 2017. paper

Alex Nowak, Soledad Villar, Afonso S. Bandeira, Joan Bruna.
Attention Solves Your TSP, Approximately. 2018. paper

Wouter Kool, Herke van Hoof, Max Welling.
Learning to Solve NP-Complete Problems - A Graph Neural Network for Decision TSP. AAAI 2019. paper

Marcelo O. R. Prates, Pedro H. C. Avelar, Henrique Lemos, Luis Lamb, Moshe Vardi.
DAG-GNN: DAG Structure Learning with Graph Neural Networks. ICML 2019. paper

Yue Yu, Jie Chen, Tian Gao, Mo Yu.
Exact Combinatorial Optimization with Graph Convolutional Neural Networks. NeurIPS 2019. paper

Maxime Gasse, Didier Chetelat, Nicola Ferroni, Laurent Charlin, Andrea Lodi.
Approximation Ratios of Graph Neural Networks for Combinatorial Problems. NeurIPS 2019. paper

Ryoma Sato, Makoto Yamada, Hisashi Kashima.

Adversarial Attack

Adversarial Attacks on Neural Networks for Graph Data. KDD 2018. paper

Daniel Zügner, Amir Akbarnejad, Stephan Günnemann.
Adversarial Attack on Graph Structured Data. ICML 2018. paper

Hanjun Dai, Hui Li, Tian Tian, Xin Huang, Lin Wang, Jun Zhu, Le Song.
Adversarial Examples on Graph Data: Deep Insights into Attack and Defense. IJCAI 2019. paper

Huijun Wu, Chen Wang, Yuriy Tyshetskiy, Andrew Docherty, Kai Lu, Liming Zhu.
Topology Attack and Defense for Graph Neural Networks: An Optimization Perspective. IJCAI 2019. paper

Kaidi Xu, Hongge Chen, Sijia Liu, Pin-Yu Chen, Tsui-Wei Weng, Mingyi Hong, Xue Lin.
Robust Graph Convolutional Networks Against Adversarial Attacks. KDD 2019. paper

Dingyuan Zhu, Ziwei Zhang, Peng Cui, Wenwu Zhu.
Certifiable Robustness and Robust Training for Graph Convolutional Networks. KDD 2019. paper

Daniel Zügner, Stephan Günnemann.
Adversarial Attacks on Node Embeddings via Graph Poisoning. ICML 2019. paper

Aleksandar Bojchevski, Stephan Günnemann.
Adversarial Attacks on Graph Neural Networks via Meta Learning. ICLR 2019. paper

Daniel Zügner, Stephan Günnemann.
PeerNets: Exploiting Peer Wisdom Against Adversarial Attacks. ICLR 2019. paper

Jan Svoboda, Jonathan Masci, Federico Monti, Michael Bronstein, Leonidas Guibas.
Certifiable Robustness to Graph Perturbations. NeurIPS 2019. paper

Aleksandar Bojchevski, Stephan Günnemann.
A Unified Framework for Data Poisoning Attack to Graph-based Semi-supervised Learning. NeurIPS 2019. paper

Xuanqing Liu, Si Si, Jerry Zhu, Yang Li, Cho-Jui Hsieh.
GNNGuard: Defending Graph Neural Networks against Adversarial Attacks. NeurIPS 2020. paper

Xiang Zhang, Marinka Zitnik.

Graph Clustering

Attributed Graph Clustering: A Deep Attentional Embedding Approach. IJCAI 2019. paper

Chun Wang, Shirui Pan, Ruiqi Hu, Guodong Long, Jing Jiang, Chengqi Zhang.
Attributed Graph Clustering via Adaptive Graph Convolution. IJCAI 2019. paper

Xiaotong Zhang, Han Liu, Qimai Li, Xiao-Ming Wu.

Graph Classification

Contextual Graph Markov Model: A Deep and Generative Approach to Graph Processing. ICML 2018. paper

Davide Bacciu, Federico Errica, Alessio Micheli.
Semi-Supervised Graph Classification: A Hierarchical Graph Perspective. WWW 2019. paper

Jia Li, Yu Rong, Hong Cheng, Helen Meng, Wenbing Huang, Junzhou Huang.
DDGK: Learning Graph Representations for Deep Divergence Graph Kernels. WWW 2019. paper

Rami Al-Rfou, Dustin Zelle, Bryan Perozzi.
Unsupervised Inductive Graph-Level Representation Learning via Graph-Graph Proximity. IJCAI 2019. paper

Yunsheng Bai, Hao Ding, Yang Qiao, Agustin Marinovic, Ken Gu, Ting Chen, Yizhou Sun, Wei Wang.
Motif-matching based Subgraph-level Attentional Convolution Network for Graph Classification. AAAI 2020. paper

Hao Peng, Jianxin Li, Qiran Gong, Yuanxing Ning, Senzhang Wang, Lifang He.
InfoGraph: Unsupervised and Semi-supervised Graph-Level Representation Learning via Mutual Information Maximization. ICLR 2020. paper

Fan-Yun Sun, Jordan Hoffman, Vikas Verma, Jian Tang.
A Fair Comparison of Graph Neural Networks for Graph Classification. ICLR 2020. paper

Federico Errica, Marco Podda, Davide Bacciu, Alessio Micheli.

Reinforcement Learning

NerveNet: Learning Structured Policy with Graph Neural Networks. ICLR 2018. paper

Tingwu Wang, Renjie Liao, Jimmy Ba, Sanja Fidler.
Structured Dialogue Policy with Graph Neural Networks. ICCL 2018. paper

Lu Chen, Bowen Tan, Sishan Long, Kai Yu.
Action Schema Networks: Generalised Policies with Deep Learning. AAAI 2018. paper

Sam Toyer, Felipe Trevizan, Sylvie Thiébaux, Lexing Xie.
Relational inductive bias for physical construction in humans and machines. CogSci 2018. paper

Jessica B. Hamrick, Kelsey R. Allen, Victor Bapst, Tina Zhu, Kevin R. McKee, Joshua B. Tenenbaum, Peter W. Battaglia.
Relational Deep Reinforcement Learning. arxiv 2018. paper

Vinicius Zambaldi, David Raposo, Adam Santoro, Victor Bapst, Yujia Li, Igor Babuschkin, Karl Tuyls, David Reichert, Timothy Lillicrap, Edward Lockhart, Murray Shanahan, Victoria Langston, Razvan Pascanu, Matthew Botvinick, Oriol Vinyals, Peter Battaglia.
Playing Text-Adventure Games with Graph-Based Deep Reinforcement Learning. NAACL 2019. paper

Prithviraj Ammanabrolu, Mark O. Riedl.
Learning Transferable Graph Exploration. NeurIPS 2019. paper

Hanjun Dai, Yujia Li, Chenglong Wang, Rishabh Singh, Po-Sen Huang, Pushmeet Kohli.
Multi-Agent Game Abstraction via Graph Attention Neural Network. AAAI 2020. paper

Yong Liu, Weixun Wang, Yujing Hu, Jianye Hao, Xingguo Chen, Yang Gao.
Graph Convolutional Reinforcement Learning. ICLR 2020. paper

Jiechuan Jiang, Chen Dun, Tiejun Huang, Zongqing Lu.
Reinforcement Learning Based Graph-to-Sequence Model for Natural Question Generation. ICLR 2020. paper

Yu Chen, Lingfei Wu, Mohammed J. Zaki.
Reinforced Genetic Algorithm Learning for Optimizing Computation Graphs. ICLR 2020. paper

Aditya Paliwal, Felix Gimeno, Vinod Nair, Yujia Li, Miles Lubin, Pushmeet Kohli, Oriol Vinyals.

Traffic Network

Spatiotemporal Multi‐Graph Convolution Network for Ride-hailing Demand Forecasting. AAAI 2019. paper

Xu Geng, Yaguang Li, Leye Wang, Lingyu Zhang, Qiang Yang, Jieping Ye, Yan Liu.
Attention Based Spatial-Temporal Graph Convolutional Networks for Traffic Flow Forecasting. AAAI 2019. paper

Shengnan Guo, Youfang Lin, Ning Feng, Chao Song, Huaiyu Wan.
Traffic Graph Convolutional Recurrent Neural Network: A Deep Learning Framework for Network-Scale Traffic Learning and Forecasting. arxiv 2018. paper

Zhiyong Cui, Kristian Henrickson, Ruimin Ke, Yinhai Wang.
Spatio-Temporal Graph Convolutional Networks: A Deep Learning Framework for Traffic Forecasting. IJCAI 2018. paper

Bing Yu, Haoteng Yin, Zhanxing Zhu.
Origin-Destination Matrix Prediction via Graph Convolution: a New Perspective of Passenger Demand Modeling. KDD 2019. paper

Yuandong Wang, Hongzhi Yin, Hongxu Chen, Tianyu Wo, Jie Xu, Kai Zheng.
Predicting Path Failure In Time-Evolving Graphs. KDD 2019. paper

Jia Li, Zhichao Han, Hong Cheng, Jiao Su, Pengyun Wang, Jianfeng Zhang, Lujia Pan.
Stochastic Weight Completion for Road Networks using Graph Convolutional Networks. ICDE 2019. paper

Jilin Hu, Chenjuan Guo, Bin Yang, Christian S. Jensen.
STG2Seq: Spatial-temporal Graph to Sequence Model for Multi-step Passenger Demand Forecasting. IJCAI 2019. paper

Lei Bai, Lina Yao, Salil.S Kanhere, Xianzhi Wang, Quan.Z Sheng.
Graph WaveNet for Deep Spatial-Temporal Graph Modeling. IJCAI 2019. paper

Zonghan Wu, Shirui Pan, Guodong Long, Jing Jiang, Chengqi Zhang.
Semi-Supervised Hierarchical Recurrent Graph Neural Network for City-Wide Parking Availability Prediction. AAAI 2020. paper

Weijia Zhang, Hao Liu, Yanchi Liu, Jingbo Zhou, Hui Xiong.
Social-BiGAT: Multimodal Trajectory Forecasting using Bicycle-GAN and Graph Attention Networks. NeurIPS 2019. paper

Vineet Kosaraju, Amir Sadeghian, Roberto Martín-Martín, Ian Reid, Hamid Rezatofighi, Silvio Savarese.
GMAN: A Graph Multi-Attention Network for Traffic Prediction. AAAI 2020. paper

Chuanpan Zheng, Xiaoliang Fan, Cheng Wang, Jianzhong Qi.

Few-shot and Zero-shot Learning

Few-Shot Learning with Graph Neural Networks. ICLR 2018. paper

Victor Garcia, Joan Bruna.
Prototype Propagation Networks (PPN) for Weakly-supervised Few-shot Learning on Category Graph. IJCAI 2019. paper

Lu Liu, Tianyi Zhou, Guodong Long, Jing Jiang, Lina Yao, Chengqi Zhang.
Edge-labeling Graph Neural Network for Few-shot Learning. CVPR 2019. paper

Jongmin Kim, Taesup Kim, Sungwoong Kim, Chang D. Yoo.
Generating Classification Weights with GNN Denoising Autoencoders for Few-Shot Learning. CVPR 2019. paper

Spyros Gidaris, Nikos Komodakis.
Zero-shot Recognition via Semantic Embeddings and Knowledge Graphs. CVPR 2018. paper

Xiaolong Wang, Yufei Ye, Abhinav Gupta.
Rethinking Knowledge Graph Propagation for Zero-Shot Learning. CVPR 2019. paper

Michael Kampffmeyer, Yinbo Chen, Xiaodan Liang, Hao Wang, Yujia Zhang, Eric P. Xing.
Multi-Label Zero-Shot Learning with Structured Knowledge Graphs. CVPR 2018. paper

Chung-Wei Lee, Wei Fang, Chih-Kuan Yeh, Yu-Chiang Frank Wang.
Learning to Propagate for Graph Meta-Learning. NeurIPS 2019. paper

LU LIU, Tianyi Zhou, Guodong Long, Jing Jiang, Chengqi Zhang.
Attribute Propagation Network for Graph Zero-shot Learning. AAAI 2020. paper

LU LIU, Tianyi Zhou, Guodong Long, Jing Jiang, Chengqi Zhang.
Graph Few-‐shot Learning via Knowledge Transfer. AAAI 2020. paper

Huaxiu Yao, Chuxu Zhang, Ying WEI, Meng Jiang, Suhang Wang, Junzhou Huang, Nitesh Chawla, Zhenhui Li.
FEW-SHOT LEARNING ON GRAPHS VIA SUPER-CLASSES BASED ON GRAPH SPECTRAL MEASURES. ICLR 2020. paper

Jatin Chauhan, Deepak Nathani, Manohar Kaul.
Learning to Extrapolate Knowledge: Transductive Few-shot Out-of-Graph Link Prediction. NeurIPS 2020. paper

Jinheon Baek, Dong Bok Lee, Sung Ju Hwang.
Graph Meta Learning via Local Subgraphs. NeurIPS 2020. paper

Kexin Huang, Marinka Zitnik.

Program Representation

Learning to Represent Programs with Graphs. ICLR 2018. paper

Miltiadis Allamanis, Marc Brockschmidt, Mahmoud Khademi.
Open Vocabulary Learning on Source Code with a Graph-Structured Cache. ICML 2019. paper

Milan Cvitkovic, Badal Singh, Anima Anandkumar.
Devign: Effective Vulnerability Identification by Learning Comprehensive Program Semantics via Graph Neural Networks. NeurIPS 2019. paper

Yaqin Zhou, Shangqing Liu, Jingkai Siow, Xiaoning Du, Yang Liu.
LambdaNet: Probabilistic Type Inference using Graph Neural Networks. ICLR 2020. paper

Jiayi Wei, Maruth Goyal, Greg Durrett, Isil Dillig.
HOPPITY: LEARNING GRAPH TRANSFORMATIONS TO DETECT AND FIX BUGS IN PROGRAMS. ICLR 2020. paper

Elizabeth Dinella, Hanjun Dai, Ziyang Li, Mayur Naik, Le Song, Ke Wang.

Social Network

Link Prediction Based on Graph Neural Networks. NeurIPS 2018. paper

Muhan Zhang, Yixin Chen.
DeepInf: Social Influence Prediction with Deep Learning. KDD 2018. paper

Jiezhong Qiu, Jian Tang, Hao Ma, Yuxiao Dong, Kuansan Wang, Jie Tang.
Characterizing and Forecasting User Engagement with In-app Action Graph: A Case Study of Snapchat. KDD 2019. paper

Yozen Liu, Xiaolin Shi, Lucas Pierce, Xiang Ren.
MCNE: An End-to-End Framework for Learning Multiple Conditional Network Representations of Social Network. KDD 2019. paper

Hao Wang, Tong Xu, Qi Liu, Defu Lian, Enhong Chen, Dongfang Du, Han Wu, Wen Su.
Is a Single Vector Enough? Exploring Node Polysemy for Network Embedding. KDD 2019. paper

Ninghao Liu, Qiaoyu Tan, Yuening Li, Hongxia Yang, Jingren Zhou, Xia Hu.
Encoding Social Information with Graph Convolutional Networks for Political Perspective Detection in News Media. ACL 2019. paper

Chang Li, Dan Goldwasser.
Fine-grained Event Categorization with Heterogeneous Graph Convolutional Networks. IJCAI 2019. paper

Hao Peng, Jianxin Li, Qiran Gong, Yangqiu Song, Yuanxing Ning, Kunfeng Lai, Philip S. Yu.
Graph Convolutional Networks with Markov Random Field Reasoning for Social Spammer Detection. AAAI 2020. paper

Yongji Wu, Defu Lian, Yiheng Xu, Le Wu, Enhong Chen.
Rumor Detection on Social Media with Bi-Directional Graph Convolutional Networks. AAAI 2020. paper

Tian Bian, Xi Xiao, Tingyang Xu, Peilin Zhao, Wenbing Huang, Yu Rong, Junzhou Huang.

Graph Matching

Deep Graph Matching Consensus. ICLR 2020. paper

Matthias Fey, Jan E. Lenssen, Christopher Morris, Jonathan Masci, Nils M. Kriege.

Computer Network

Unveiling the potential of Graph Neural Networks for network modeling and optimization in SDN. ACM SOSR 2019. paper

Krzysztof Rusek, José Suárez-Varela, Albert Mestres, Pere Barlet-Ros, Albert Cabellos-Aparicio.

liukangling/GNNPapers

Must-read papers on GNN