liuqx315
Self-organization and complex ecosystems Periglacial geomorphology
Shanghai Jiao Tong UniversityShanghai
Pinned Repositories
2017-Henderson-RevFishBio
Code and data for Henderson ME, Mills KE, Thomas AC, Pershing AJ, Nye JA (2017) Effects of spring onset and summer duration on fish species distribution and biomass along the Northeast United States continental shelf. Reviews in Fish Biology and Fisheries 27:411-424
Ant-Colony-Optimization
Repository containing code for visualizing Ant Colony Optimization algorithms for clustering
B.Wang-et-al-PNAS-2022
clMussels-Multscale
Fairy-circles-patterns-on-saltmarshes
This code for "Fairy circles imply high resilience of self-organized salt marshes" by L.-X. Zhao, K. Zhang, K. Siteur, X.-Z. Li, Q.-X. Liu, J. van de Koppel. The codes were implemented on anaconda platform with pyopencl package and Jupyter.
MarineReserves
Eco-evolutionary dynamics of a simple size-structured population mode including a marine reserve
Phase-separation-patterned-ground
This repository provides the OpenCL and Matlab codes that simulate the phase separation model 1 and model 2 on our manuscript. "Ice needles weave patterns of stones in freezing landscapes" by Anyuan Li, Norikazu Matsuoka, Fujun Niu, Jing Chen, Zhenpeng Ge, Wensi Hu, Desheng Li, Bernard Hallet, Johan van de Koppel, Nigel Goldenfeld, and Quan-Xing Liu (2021), PNAS.
PS-Resilience-in-Ecosystems
Self-organized-crack-patterns
This repository provides the data and R codes that simulate the self-organized crack patterns on our manuscript. "Biophysical self-organization amplifies the resilience of salt marshes" by Kang Zhang, Jiaguo Yan, Qiang He, Chi Xu, Johan van de Koppel, Bo Wang, Baoshan Cui, and Quan-Xing Liu.
liuqx315's Repositories
liuqx315/Phase-separation-patterned-ground
This repository provides the OpenCL and Matlab codes that simulate the phase separation model 1 and model 2 on our manuscript. "Ice needles weave patterns of stones in freezing landscapes" by Anyuan Li, Norikazu Matsuoka, Fujun Niu, Jing Chen, Zhenpeng Ge, Wensi Hu, Desheng Li, Bernard Hallet, Johan van de Koppel, Nigel Goldenfeld, and Quan-Xing Liu (2021), PNAS.
liuqx315/B.Wang-et-al-PNAS-2022
liuqx315/clMussels-Multscale
liuqx315/MarineReserves
Eco-evolutionary dynamics of a simple size-structured population mode including a marine reserve
liuqx315/PS-Resilience-in-Ecosystems
liuqx315/Self-organized-crack-patterns
This repository provides the data and R codes that simulate the self-organized crack patterns on our manuscript. "Biophysical self-organization amplifies the resilience of salt marshes" by Kang Zhang, Jiaguo Yan, Qiang He, Chi Xu, Johan van de Koppel, Bo Wang, Baoshan Cui, and Quan-Xing Liu.
liuqx315/assessing-global-fisheries
Materials for Ovando et al. (2021) "Improving estimates of the state of global fisheries depends on better data" Fish and Fisheries
liuqx315/cellpylib
A library for working with Cellular Automata, for Python.
liuqx315/Clasts-Pattern-Mars
liuqx315/coral
Parallel spectral solver for partial differential equations in the plane layer geometry.
liuqx315/Data_Code_JAppEcol
The
liuqx315/DeepLabCut
Official implementation of DeepLabCut: Markerless pose estimation of user-defined features with deep learning for all animals incl. humans
liuqx315/DeepTrack2
DeepTrack-2.0
liuqx315/fish-patterns
liuqx315/FishLife
Estimate fish traits for all marine fish species globally
liuqx315/FoodProvision2019-reply
liuqx315/GPU-Cellular-Automata
liuqx315/information-cascades
Examining how information cascades driven by polarized media can cause "echo chambers" to emerge in social networks. Agent-based model and empirical data collection from Twitter.
liuqx315/LEM-wLE
A landscape evolution model that incorporates lateral erosion
liuqx315/marlin
A package for simulating 2-D populations of fauna, fisheries, and marine protected areas
liuqx315/nER-of-Creek-Patterns
liuqx315/population-effects-of-mpas
Repository for Ovando et al. (2021) - The Population Effects of Marine Protected Areas
liuqx315/pycma
Python implementation of CMA-ES
liuqx315/rreusser.github.io
rreusser.github.io
liuqx315/simba
SimBA (Simple Behavioral Analysis), a pipeline and GUI for developing supervised behavioral classifiers
liuqx315/spatialRF
R package to fit spatial models with Random Forest
liuqx315/spatialwarnings
An R package to compute spatial early-warning signals of ecosystem degradation
liuqx315/stardist
StarDist - Object Detection with Star-convex Shapes
liuqx315/TagLab
A CNN based image segmentation tool oriented to marine data analysis
liuqx315/Z.Ge-and-QX.Liu-Herbivore_plant_Ecol-Lett-2022