Pinned Repositories
OnionDecomposition.jl
A Julia implementation of the algorithms described in Hébert-Dufresne, L. et al., Multi-scale structure and topological anomaly detection via a new network statistic: The onion decomposition. Sci. Rep. 6, 31708; doi: 10.1038/srep31708 (2016)
TopoFun
An R implementation of the genetic algorithm described in Janbain A et al. A machine learning method to improve the functional similarity of gene co-expression modules. NAR Genom Bioinform 2021
ljournot's Repositories
ljournot/OnionDecomposition.jl
A Julia implementation of the algorithms described in Hébert-Dufresne, L. et al., Multi-scale structure and topological anomaly detection via a new network statistic: The onion decomposition. Sci. Rep. 6, 31708; doi: 10.1038/srep31708 (2016)
ljournot/TopoFun
An R implementation of the genetic algorithm described in Janbain A et al. A machine learning method to improve the functional similarity of gene co-expression modules. NAR Genom Bioinform 2021