lmdu/pyfastx

Issues

• pip install broken in version 0.8.0

  #23 opened 4 years ago
  2

• Filter fastq file (performance)

  #22 opened 4 years ago
  1

• segfaults

  #21 opened 2 years ago
  1

• Add full_name=True option to pyfastx.Fastq

  #20 opened 4 years ago
  2

• pyfastx.Fasta(build_index=False) using all available threads

  #18 opened 4 years ago
  1

• Return full sequence name without building index

  #17 opened 4 years ago
  6

• Calculate Q30？

  #16 opened 4 years ago
  4

• Difference in content when parsing fastq files.

  #15 opened 4 years ago
  2

• Can an index be "shared" by multiple processes?

  #14 opened 4 years ago
  2

• Error indexing FASTQ; are there header length or character limitations?

  #13 opened 5 years ago
  4

• Poor performance when reading gzipped FASTQ sequentially

  #12 opened 5 years ago
  6

• pyfastx sometimes gives an erroneously shifted subsequence from hg19 reference

  #11 opened 5 years ago
  5

• Silent errors when reading other compressed formats

  #10 opened 5 years ago
  2

• get seq count and length error

  #9 opened 5 years ago
  1

• Writing fast

  #7 opened 5 years ago
  3

• pyfastx.Fasta leaking memory?

  #6 opened 5 years ago
  4

• Questions about pyfastx obtaining sequence

  #5 opened 5 years ago
  1

• Read comment

  #4 opened 5 years ago
  4

• iteration on record?

  #3 opened 5 years ago
  1

• Does pyfastx split fasta files sequentially?

  #2 opened 5 years ago
  7

• Seems to have trouble with large fasta files

  #1 opened 5 years ago
  2