Pinned Repositories
AMBER-Maestro-lipid-tutorial
Tutorial to build AMBER compatable protein+lipid systems
apbs-pdb2pqr
APBS and PDB2PQR software
FIMAS
Fluorescent Imaging Analysis Software
g_mmpbsa
MM-PBSA method for GROMACS. For full description, please visit homepage:
genomics_general
General tools for genomic analyses.
GEO
lonemen.github.io
BY Blog ->
pb-assembly
PacBio Assembly Tool Suite: Reads in ⇨ Assembly out
plotGODESeq
code to integrate differential gene expression and gene ontology over-representation in a 2D plot
Plotsofdata
Shiny App for comparison of samples
lonemen's Repositories
lonemen/AMBER-Maestro-lipid-tutorial
Tutorial to build AMBER compatable protein+lipid systems
lonemen/apbs-pdb2pqr
APBS and PDB2PQR software
lonemen/FIMAS
Fluorescent Imaging Analysis Software
lonemen/g_mmpbsa
MM-PBSA method for GROMACS. For full description, please visit homepage:
lonemen/genomics_general
General tools for genomic analyses.
lonemen/GEO
lonemen/lonemen.github.io
BY Blog ->
lonemen/pb-assembly
PacBio Assembly Tool Suite: Reads in ⇨ Assembly out
lonemen/plotGODESeq
code to integrate differential gene expression and gene ontology over-representation in a 2D plot
lonemen/Plotsofdata
Shiny App for comparison of samples
lonemen/Population_Genetics_in_R
A primer for computational tools to analyze genetics of populations in R
lonemen/RNAseq-workflow
A repository for setting up a RNAseq workflow
lonemen/runxtb.bash
wrapper for the extended tight-binding semi-empirical program package xtb
lonemen/trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly
lonemen/tutorials
Tutorials on phylogenetic and phylogenomic inference