Pinned Repositories
airflow
AirFlow is a system to programmatically author, schedule and monitor data pipelines.
bam-readcount
count DNA sequence reads in BAM files
basicfiltering
Basic filtering scripts for various mutation calling tools
BG7
bacterial genome annotation system
catsvsdogs
This just classifies cats vs. dogs, as per https://www.kaggle.com/c/dogs-vs-cats-redux-kernels-edition/data
cmo
Modular bioinformatics pipelines for the CMO
dnanexus_accuracy_evaluator
facets
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
fireworks
The Fireworks Workflow Management Repo.
GenoLogics-LIMS-Python
Python interface to GenoLogics LIMS via its REST API.
lordzappo's Repositories
lordzappo/airflow
AirFlow is a system to programmatically author, schedule and monitor data pipelines.
lordzappo/bam-readcount
count DNA sequence reads in BAM files
lordzappo/basicfiltering
Basic filtering scripts for various mutation calling tools
lordzappo/BG7
bacterial genome annotation system
lordzappo/catsvsdogs
This just classifies cats vs. dogs, as per https://www.kaggle.com/c/dogs-vs-cats-redux-kernels-edition/data
lordzappo/cmo
Modular bioinformatics pipelines for the CMO
lordzappo/dnanexus_accuracy_evaluator
lordzappo/facets
Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.
lordzappo/fireworks
The Fireworks Workflow Management Repo.
lordzappo/GenoLogics-LIMS-Python
Python interface to GenoLogics LIMS via its REST API.
lordzappo/hotspots
Identifying recurrent mutations in cancer
lordzappo/old_roslin
prism prototype
lordzappo/replace_allele_counts
This repo helps to replace the allele counts in maf file after genotyping
lordzappo/roslin
Roslin is a portable and reproducible workflow infrastructure for Cancer Genomic Sequencing Analysis
lordzappo/roslin-core
Core of the Roslin pipeline
lordzappo/rowing-mkr1010
Arduino Rowing Computer with MKR1010
lordzappo/Test_DNANexus_APP
lordzappo/toil
A scalable, efficient, cross-platform and easy-to-use workflow engine in pure Python
lordzappo/treeomics
Decrypting somatic mutation patterns to reveal the evolution of cancer
lordzappo/variant-filter
A false-positive filter for variants called from massively parallel sequencing
lordzappo/wes-filters
Filters for false-positive mutation calls in whole-exome sequencing
lordzappo/Wooey
A Django app that creates automatic web UIs for Python scripts.