Does[0]Compute Fall 2016 – Spring 2017 Syllabus
- File Conversions and Other Utilities
- Sequence Cleaning and Quality Control
- Read Mapping with Short and Long Read Aligners
- SAM Processing
- Genomic Ranges
- Variant Detection
- Variant Annotation
- Quantitiave Genetics
- Population Genetics
We meet every Tuesday from 2:00 PM to 3:00 PM in 213 Boralug Hall for the Spring 2017 semester
Discussion Leader: Fernanda Rodriguez
February 7st: Variant Detection
Discussion Leader: Li Lei
February 14th: Variant Detection
Discussion Leader: Peter Morrell
February 21st: Variant Detection
Discussion Leader: Paul Hoffman
February 28th: Variant Annotation
Discussion Leader: Tom Kono
March 7th: Quantitiave Genetics
Discussion Leader: Li Lei
March 14th: Quantitiave Genetics
Discussion Leader: Tom Kono
March 21st: Quantitiave Genetics
Discussion Leader: Alex Olhoff
March 28th: Big Data Visualization
Discussion Leader: Alex Olhoff
April 4th: Quantitiave Genetics
Discussion Leader: Peter Morrell
April 11th: Population Genetics
Discussion Leader: Chaochih Liu
April 18th: Population Genetics
Discussion Leader: Chaochih Liu
April 25th: Population Genetics
May 2nd: 10xgenomics data analysis
Discussion Leader:John R Garbe in UMGC
May 9nd: Population Genetics
Fall 2016 Meetings and Materials
September 22nd, 2016: File Conversions and Other Utilities
Discussion Leader: Li Lei and Paul Hoffman
September 29th, 2016: File Conversions and Other Utilities
Discussion Leader: Chaochih Liu
October 6th, 2016: Sequence Cleaning and Quality Control
Discussion Leader: Paul Hoffman
October 13th, 2016: Sequence Cleaning and Quality Control
Discussion Leader: Chaochih Liu
October 20th, 2016: Short Read Aligners
Discussion Leader: Peter Morrell
October 27th, 2016: Short Read Aligners
Discussion Leader: Ying Zhang
Novermber 3rd, 2016: Long Read Aligners
Discussion Leader: Kevin Silverstein and Corey Carter
November 10th, 2016: SAM Processing
Discussion Leader: Li Lei
November 17th, 2016: SAM Processing
Discussion Leader: Colin Pierce
December 1st, 2016: Advanced Software Installation
Discussion Leader: Paul Hoffman
December 8th, 2016: CANCELED
December 15th, 2016: Genomic Ranges
Discussion Leader: Chaochih Liu