This Singularity container was constructed using https://github.com/tactcomplabs/sst-containers, specifically sstpackage-11.1.0-ubuntu-20.04.def
In order to use Singularity on Ubuntu, please visit http://neuro.debian.net/ and use the dropdown menus under "Get NeuroDebian" to select your Ubuntu version and pick a USA server to download from. The below example will work for Ubuntu 20.04:
wget -O- http://neuro.debian.net/lists/focal.us-nh.libre | sudo tee /etc/apt/sources.list.d/neurodebian.sources.list
sudo apt-key adv --recv-keys --keyserver hkps://keyserver.ubuntu.com 0xA5D32F012649A5A9You can then install singularity for Ubuntu by doing:
sudo apt install singularity-containerhttps://sylabs.io/guides/3.0/user-guide/installation.html#install-the-centos-rhel-package-using-yum
You need to enable the epel repo, and then you can install singularity:
sudo yum install epel-release
sudo yum install singularity-runtimeGitHub LFS (Large File Storage) apparently has size limits and download limitations which seem counter-productive... The pre-built SST singularity container will be provided to you and can be used in place of this repository. The sif should be placed in /usr/local/bin/