lukaskontenis

lukaskontenis's Stars

• bistromath/voyager

  Voyager signal processing routines

  Language:Jupyter Notebook172

• chromatix-team/chromatix

  Differentiable wave optics using JAX! Documentation can be found at https://chromatix.readthedocs.io

  Language:Python7913

• klecknerlab/simple_pyspin

  A Pythonic class-based wrapper for the FLIR PySpin Library

  Language:Python5524

• napari/napari-animation

  A napari plugin for making animations

  Language:Python7927

• mjhoptics/opticalglass

  Tools for reading commercial optical glass catalogs

  Language:Python2910

• Sterncat/opticspy

  python optics module

  Language:Python472128

• quartiq/rayopt

  Python optics and lens design, raytracing

  Language:Python26850

• mjhoptics/ray-optics

  geometric ray tracing for optical systems

  Language:Python28461

• DCC-Lab/RayTracing

  Simple ray tracing library in Python for optical design that considers simple optical elements (with ABCD ray matrices) but also finite diameters of elements to calculate aperture and field stops, field of view, etc... Useful to validate the design of an optical system (lenses positions, power and diameters). Also permits the propagation of gaussian laser beams through the same elements.

  Language:Python26847

• nzhagen/zemaxglass

  A suite of utilities of analyzing optical glasses using the Zemax glass library

  Language:Python4217

• franklongford/PyFibre

  PyFibre - an image analysis tookit for fibrous tissue

  Language:Python4

• maweigert/biobeam

  GPU accelerated beam propagation tools for biological light tissue simulations

  Language:Python359

• xcasas/ImSwitch

  ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.

  2

• Neumi/ethersweep

  Open Source, easy to use Ethernet connected stepper motor controller. Built in FreeCAD, KiCAD and Arduino.

  Language:C++50658

• napari/napari

  napari: a fast, interactive, multi-dimensional image viewer for python

  Language:Python2.3k428

• light-conversion-public/scilightcon

  scilightcon library repository

  Language:Python22

• kavli-ntnu/MINI2P_toolbox

  The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More details can be found in the original paper "Large-scale two-photon calcium imaging in freely moving mice(2021)".

  Language:MATLAB9120

• bauerdavid/napari-nD-annotator

  Language:Python292

• cabooster/DeepCAD-RT

  DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning

  Language:Jupyter Notebook10013

• Matchboxscope/Matchboxscope

  ESP32-based mini microscope for fluidic device observation

  Language:C++9113

• samhitech/microEye

  A python toolkit for fluorescence microscopy.

  Language:Python207

• m-beau/NeuroPyxels

  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.

  Language:Jupyter Notebook11528

• royerlab/daxi

  High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy

  Language:Python262

• monperrus/bibtexbrowser

  Beautiful publication lists with bibtex and PHP (standalone or in Wordpress)

  Language:PHP8654

• pyNLO/PyNLO

  Python package for nonlinear optics

  Language:Python10655

• Moskari/xevacam

  Xevacam Python 3 package is for controlling and capturing image stream from a Xenics XEVA-196 or similar camera. The camera is capable of capturing wider electromagnetic spectrum than a normal camera.

  Language:Python105

• raml2html/raml2html

  RAML to HTML documentation generator.

  Language:JavaScript1.1k250

• raml-org/raml-spec

  RAML Specification

  3.9k857

• tenss/bench_optics

  Basic bench optics exercises

  Language:TeX33

• BaselLaserMouse/bench_optics

  Basic bench optics exercises

  Language:TeX12