Lunter group

Projects developed by the Lunter group (WIMM, Oxford and UMCG, Groningen)

Oxford, United Kingdom

Pinned Repositories

bamsplit
Split a BAM file by haplotype support
Language:Python15 3 21
EquivariantNetworks
Language:Python4 4 00
luntergroup.github.io
0 3 00
octopus
Bayesian haplotype-based mutation calling
Language:C++299 19 26537
octopus-paper
Paper for octopus variant caller
Language:Jupyter Notebook4 3 00
polyploid
Benchmarking variant calling in polyploids
Language:Jupyter Notebook12 4 02
single-cell
Benchmarking single-cell DNA variant calling
Language:Jupyter Notebook2 3 00
smcsmc
Demographic inference from whole genomes
Language:C++11 5 264
smcsmcScrm
scrm jz_stable branch
Language:C++0 6 10
utilities
Language:Python0 6 52

Lunter group's Repositories

luntergroup/octopus
Bayesian haplotype-based mutation calling
Language:C++299 19 26537
luntergroup/bamsplit
Split a BAM file by haplotype support
Language:Python15 3 21
luntergroup/polyploid
Benchmarking variant calling in polyploids
Language:Jupyter Notebook12 4 02
luntergroup/smcsmc
Demographic inference from whole genomes
Language:C++11 5 264
luntergroup/EquivariantNetworks
Language:Python4 4 00
luntergroup/octopus-paper
Paper for octopus variant caller
Language:Jupyter Notebook4 3 00
luntergroup/single-cell
Benchmarking single-cell DNA variant calling
Language:Jupyter Notebook2 3 00
luntergroup/analysis
Analysis of inference methods on standard population models
Language:Python0 4 10
luntergroup/luntergroup.github.io
0 3 00
luntergroup/smcsmcScrm
scrm jz_stable branch
Language:C++0 6 10
luntergroup/utilities
Language:Python0 6 52
luntergroup/stdpopsim
A library of standard simulation models for msprime
Language:Python1 0