lua_circular_buffer: A C repository from luoyanglyh

Lua Circular Buffer Library

Overview

The circular buffer library is a sliding window time series data store with basic data analysis functionality.

Installation

Prerequisites

C compiler (GCC 4.7+, Visual Studio 2013, MinGW (Lua 5.1))
Lua 5.1 or LuaJIT
CMake (2.8.7+)

CMake Build Instructions

git clone https://github.com/mozilla-services/lua_circular_buffer.git
cd lua_circular_buffer 
mkdir release
cd release

# UNIX
cmake -DCMAKE_BUILD_TYPE=release ..
make

# Windows Visuas Studio 2013
cmake -DCMAKE_BUILD_TYPE=release -G "NMake Makefiles" ..
nmake

ctest
cpack

Module

Example Usage

require "circular_buffer"

local cb = circular_buffer.new(1440, 1, 60)
local ERRORS = cb:set_header(1, "Errors")
cb:add(1e9, ERRORS, 1)
cb:add(1e9, ERRORS, 7)
local val = cb:get(1e9, ERRORS)
-- val == 8

API Functions

new

require "circular_buffer"
local cb = circular_buffer.new(1440, 1, 60)

Import the Lua circular_buffer via the Lua 'require' function. The module is globally registered and returned by the require function.

Arguments

rows (unsigned) The number of rows in the buffer (must be > 1)
columns (unsigned)The number of columns in the buffer (must be > 0)
seconds_per_row (unsigned) The number of seconds each row represents (must be > 0).
enable_delta (bool optional, default false) When true the changes made to the circular buffer between delta outputs are tracked.

Return

circular_buffer userdata object.

version

local v = circular_buffer.version()
-- v == "0.1.0"

Returns a string with the running version of circular_buffer.

Arguments

none

Return

Semantic version string

API Methods

Note: All column arguments are 1 based. If the column is out of range for the configured circular buffer a fatal error is generated.

add

d = cb:add(1e9, 1, 1)
-- d == 1
d = cb:add(1e9, 1, 99)
-- d == 100

Adds a value to the specified row/column in the circular buffer.

Arguments

nanosecond (unsigned) The number of nanosecond since the UNIX epoch. The value is used to determine which row is being operated on.
column (unsigned) The column within the specified row to perform an add operation on.
value (double) The value to be added to the specified row/column.

Return

The value of the updated row/column or nil if the time was outside the range of the buffer.

set

d = cb:set(1e9, 1, 1)
-- d == 1
d = cb:set(1e9, 1, 99)
-- d == 99

Overwrites the value at a specific row/column in the circular buffer.

Arguments

nanosecond (unsigned) The number of nanosecond since the UNIX epoch. The value is used to determine which row is being operated on.
column (unsigned) The column within the specified row to perform a set operation on.
value (double) The value to be overwritten at the specified row/column. For aggregation methods "min" and "max" the value is only overwritten if it is smaller/larger than the current value.

Return

The resulting value of the row/column or nil if the time was outside the range of the buffer.

get

d = cb:get(1e9, 1)
-- d == 99

Fetches the value at a specific row/column in the circular buffer.

Arguments

nanosecond (unsigned) The number of nanosecond since the UNIX epoch. The value is used to determine which row is being operated on.
column (unsigned) The column within the specified row to retrieve the data from.

Return

The value at the specifed row/column or nil if the time was outside the range of the buffer.

get_configuration

rows, columns, seconds_per_row = cb:get_configuration()
-- rows == 1440
-- columns = 1
-- seconds_per_row = 60

Returns the configuration options passed to new.

Arguments

none

Return

The circular buffer dimension values specified in the constructor.
- rows
- columns
- seconds_per_row

set_header

column = cb:set_header(1, "Errors")
-- column == 1

Sets the header metadata for the specifed column.

Arguments

column (unsigned) The column number where the header information is applied.
name (string) Descriptive name of the column (maximum 15 characters). Any non alpha numeric characters will be converted to underscores. (default: Column_N)
unit (string optional) The unit of measure (maximum 7 characters). Alpha numeric, '/', and '*' characters are allowed everything else will be converted to underscores. i.e. KiB, Hz, m/s (default: count)
aggregation_method (string optional) Controls how the column data is aggregated when combining multiple circular buffers.
- sum The total is computed for the time/column (default).
- min The smallest value is retained for the time/column.
- max The largest value is retained for the time/column.
- none No aggregation will be performed the column.

Return

The column number passed into the function.

get_header

name, unit, aggregation_method = cb:get_header(1)
-- name == "Errors"
-- unit == "count"
-- aggregation_method == "sum"

Retrieves the header metadata for the specified column.

Arguments

column (unsigned) The column number of the header information to be retrieved.

Return

The current values of specified header column.
- name
- unit
- aggregation_method

compute

cb:set(1e9, 5)
cb:set(60e9, 10)
cb:set(180e9, 1)
d, active_rows = cb:compute("sum", 1)
-- d = 16
-- active_rows = 3

Performs a basic calculation on a column spaning the specified number of rows.

Arguments

function (string) The name of the compute function (sum|avg|sd|min|max|variance).
column (unsigned) The column that the computation is performed against.
start (unsigned optional) The number of nanosecond since the UNIX epoch. Sets the start time of the computation range; if nil the buffer's start time is used.
end (unsigned optional) The number of nanosecond since the UNIX epoch. Sets the end time of the computation range (inclusive); if nil the buffer's end time is used. The end time must be greater than or equal to the start time.

Returns

The result of the computation for the specifed column over the given range or nil if the range fell outside of the buffer.
The number of rows that contained a valid numeric value.

mannwhitneyu

local cb = circular_buffer.new(40,1,1)
local data = {15309,14092,13661,13412,14205,15042,14142,13820,14917,13953,14320,14472,15133,13790,14539,14129,14363,14202,13841,13610,13759,14428,14851,13838,13819,14468,14989,15557,14380,13500,14818,14632,13631,14663,14532,14188,14537,14109,13925,15022}
for i,v in ipairs(data) do
    cb:set(i*1e9, 1, v)
end
local u, p = cb:mannwhitneyu(1, 1e9, 20e9, 21e9, 40e9)
-- u == 171
-- p == 0.22037

Computes the Mann-Whitney rank test on samples x and y.

Arguments

column (unsigned) The column that the computation is performed against.
start_1 (unsigned) The number of nanosecond since the UNIX epoch.
end_1 (unsigned) The number of nanosecond since the UNIX epoch. The end time must be greater than or equal to the start time.
start_2 (unsigned).
end_2 (unsigned).
use_continuity (bool optional) Whether a continuity correction (1/2) should be taken into account (default: true).

Returns (nil if the range fell outside the buffer)

U_1 Mann-Whitney statistic.
One-sided p-value assuming a asymptotic normal distribution.

Note: Use only when the number of observation in each sample is > 20 and you have 2 independent samples of ranks. Mann-Whitney U is significant if the u-obtained is LESS THAN or equal to the critical value of U.

This test corrects for ties and by default uses a continuity correction. The reported p-value is for a one-sided hypothesis, to get the two-sided p-value multiply the returned p-value by 2.

current_time

t = cb:current_time()
-- t == 86340000000000

Returns the timestamp of the newest row.

Arguments

none

Return

The time of the most current row in the circular buffer (nanoseconds).

format

cb:format("cbufd")

Sets an internal flag to control the output format of the circular buffer data structure; if deltas are not enabled or there haven't been any modifications, nothing is output.

Arguments

format (string)
- cbuf The circular buffer full data set format.
- cbufd The circular buffer delta data set format.

Return

The circular buffer object.

Output

todo make this accessible as __tostring for non lua_sandbox use.

-- only available when using the lua_sandbox
cb:format("cbuf")
output(cb) -- serializes the full buffer
cb:format("cbufd")
output(cb) -- serializes the delta of the buffer since the last output

The circular buffer can be passed to the lua_sandbox output() function. The output format can be selected using the format() function.

The cbuf (full data set) output format consists of newline delimited rows starting with a json header row followed by the data rows with tab delimited columns. The time in the header corresponds to the time of the first data row, the time for the other rows is calculated using the seconds_per_row header value.

{json header}
row1_col1\trow1_col2\n
.
.
.
rowN_col1\trowN_col2\n

The cbufd (delta) output format consists of newline delimited rows starting with a json header row followed by the data rows with tab delimited columns. The first column is the timestamp for the row (time_t). The cbufd output will only contain the rows that have changed and the corresponding delta values for each column.

{json header}
row14_timestamp\trow14_col1\trow14_col2\n
row10_timestamp\trow10_col1\trow10_col2\n

Sample Cbuf Output

{"time":2,"rows":3,"columns":3,"seconds_per_row":60,"column_info":[{"name":"HTTP_200","unit":"count","aggregation":"sum"},{"name":"HTTP_400","unit":"count","aggregation":"sum"},{"name":"HTTP_500","unit":"count","aggregation":"sum"}]}
10002   0   0
11323   0   0
10685   0   0

luoyanglyh/lua_circular_buffer

Lua Circular Buffer Library

Overview

Installation

Prerequisites

CMake Build Instructions

Module

Example Usage

API Functions

new

version

API Methods

add

set

get

get_configuration

set_header

get_header

compute

mannwhitneyu

current_time

format

Output

Sample Cbuf Output