luoyuanlab
Luo Lab at Northwestern University. Interests: machine learning, natural language processing, integrative genomics, computational phenotyping
Department of Preventive Medicine, Division of Health & Biomedical Informatics at Feinberg School of Medicine in Northwestern UniversityChicago
Pinned Repositories
3dmice
Missing data imputation for longitudinal multi-variable EHR data. Paper in JAMIA.
AI_and_Data_Science_Year_In_Reviews
autism_precision_medicine
Nature Medicine paper. A Multidimensional Precision Medicine Approach for Autism Subtype Identification.
Clinical-Longformer
panther
PANTHER: Pathway Augmented Nonnegative Tensor factorization for HighER-order feature learning. AAAI 2021
seg_cnn
Segment CNN for relation classification. Paper in JAMIA.
seg_gcn
Segment graph convolutional neural network for relation classification. Paper in JAMIA.
SHINE
NeurIPS 2022 paper, SubHypergraph Inductive Neural nEtwork
SOAR
text_gcn_tutorial
A tutorial & minimal example (8min on CPU) for Graph Convolutional Networks for Text Classification. AAAI 2019
luoyuanlab's Repositories
luoyuanlab/Clinical-Longformer
luoyuanlab/text_gcn_tutorial
A tutorial & minimal example (8min on CPU) for Graph Convolutional Networks for Text Classification. AAAI 2019
luoyuanlab/SOAR
luoyuanlab/SHINE
NeurIPS 2022 paper, SubHypergraph Inductive Neural nEtwork
luoyuanlab/autism_precision_medicine
Nature Medicine paper. A Multidimensional Precision Medicine Approach for Autism Subtype Identification.
luoyuanlab/AI_and_Data_Science_Year_In_Reviews
luoyuanlab/seg_gcn
Segment graph convolutional neural network for relation classification. Paper in JAMIA.
luoyuanlab/panther
PANTHER: Pathway Augmented Nonnegative Tensor factorization for HighER-order feature learning. AAAI 2021
luoyuanlab/3dmice
Missing data imputation for longitudinal multi-variable EHR data. Paper in JAMIA.
luoyuanlab/seg_cnn
Segment CNN for relation classification. Paper in JAMIA.
luoyuanlab/mimic_imputation
Generating the imputation dataset for the DACMI 2019 challenge
luoyuanlab/MLfairHF
luoyuanlab/rangetree
Implementation of the fastest interval tree querying algorithm based on range tree data structure. Work on genomic and time intervals etc. Paper in Scientific Reports.
luoyuanlab/lapnlp
LISP Architecture for Portable Natural Language Processing. BIBM 2018.
luoyuanlab/scanmap
Supervised Confounding Aware NMF for Polygenic Risk Modeling. MLHC 2020.
luoyuanlab/stdgcn
luoyuanlab/hnmf
Hybrid NMF to integrate genomic data and phenotype data for better patient subtyping. Paper in Bioinformatics.
luoyuanlab/gait
luoyuanlab/HyperGCN
NeurIPS 2019: HyperGCN: A New Method of Training Graph Convolutional Networks on Hypergraphs
luoyuanlab/mimic4
Exploration code on MIMIC-IV
luoyuanlab/twitter_vaccine_analysis