m-orton
Currently a PhD Candidate in Bioinformatics at the University of Guelph.
Biodiversity Institute of OntarioGuelph
Pinned Repositories
web-module
An R pipeline that can effectively perform phylogenetic comparisons on large numbers of species based on latitude and genetic similarity.
Animal-Barcode-Classifier-Benchmarking
Taxonomic Classification Methods for Animal Barcode Datasets: Benchmarking for Accuracy and Speed
Arctic-Biogeographical-Analysis-Pipeline
Arctic Community Similarity using DNA Barcoding Data
Evolutionary-Rates-Analysis-Pipeline
The purpose of this repository is to develop software pipelines in R that can perform large scale phylogenetics comparisons of various taxa found on the Barcode of Life Database (BOLD) API.
Java-Scripts
This will showcase some of the Java scripts (as in .java) scripts I have written
Overlaying-Geographical-Points-on-a-Choropleth-Map-using-Plotly
A simple script using plotly that allows you to discretely color individual states (usa) and then overlay them with geographical coordinate data.
Perl-Scripts
This will showcase some of the perl scripts I have written
PlotlyMapTutorial
Map plotting with Plotly using public BOLD API COI data
ssPRIMER
ssPRIMER (or species-specific PRIMER) is a shiny based software tool that can be used to design species-specific primer sets and Taqman probes for qPCR assays.
m-orton's Repositories
m-orton/Evolutionary-Rates-Analysis-Pipeline
The purpose of this repository is to develop software pipelines in R that can perform large scale phylogenetics comparisons of various taxa found on the Barcode of Life Database (BOLD) API.
m-orton/ssPRIMER
ssPRIMER (or species-specific PRIMER) is a shiny based software tool that can be used to design species-specific primer sets and Taqman probes for qPCR assays.
m-orton/Arctic-Biogeographical-Analysis-Pipeline
Arctic Community Similarity using DNA Barcoding Data
m-orton/PlotlyMapTutorial
Map plotting with Plotly using public BOLD API COI data
m-orton/Animal-Barcode-Classifier-Benchmarking
Taxonomic Classification Methods for Animal Barcode Datasets: Benchmarking for Accuracy and Speed
m-orton/Java-Scripts
This will showcase some of the Java scripts (as in .java) scripts I have written
m-orton/Overlaying-Geographical-Points-on-a-Choropleth-Map-using-Plotly
A simple script using plotly that allows you to discretely color individual states (usa) and then overlay them with geographical coordinate data.
m-orton/Perl-Scripts
This will showcase some of the perl scripts I have written