m9h

Computational biophysicist

Center17San Francisco, CA

Pinned Repositories

ANTsPy
Advanced Normalization Tools in Python
Language:C++1 1 00
arxiv-sanity-preserver
Web interface for browsing, search and filtering recent arxiv submissions
Language:Python1 1 01
autoCV
automatic generation of CV
Language:Python1 1 00
bambi
BAyesian Model-Building Interface (BAMBI) in Python.
Language:Python1 1 00
bdtoolkit
The Brain Dynamics Toolbox
Language:MATLAB1 1 00
brain2mesh
Brain2Mesh - a one-liner for high-quality brain mesh generation
Language:MATLAB1 1 00
ConnectopicMapping
Class and methods to implement Haak's pipeline in Python.
Language:Python1 1 01
Fijee-Project
Forward inverse / Electroencephalogram software. Building a new forward solution.
Language:C++0 1 00
pymc3
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano
Language:Python2 1 01
pyradigm
Python class defining a machine learning dataset ensuring key-based correspondence and maintaining integrity
Language:Jupyter Notebook2 2 00

m9h's Repositories

m9h/pymc3
Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano
Language:Python2 1 01
m9h/pyradigm
Python class defining a machine learning dataset ensuring key-based correspondence and maintaining integrity
Language:Jupyter Notebook2 2 00
m9h/ANTsPy
Advanced Normalization Tools in Python
Language:C++1 1 00
m9h/autoCV
automatic generation of CV
Language:Python1 1 00
m9h/bambi
BAyesian Model-Building Interface (BAMBI) in Python.
Language:Python1 1 00
m9h/bdtoolkit
The Brain Dynamics Toolbox
Language:MATLAB1 1 00
m9h/brain2mesh
Brain2Mesh - a one-liner for high-quality brain mesh generation
Language:MATLAB1 1 00
m9h/cardio
CardIO is a library for data science research of heart signals
Language:Jupyter Notebook1 1 0
m9h/eeg-notebooks
A collection of classic EEG experiments implemented with Python and Jupyter notebooks
Language:Python1 1 0
m9h/hnn
The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.
Language:Python1 2 01
m9h/img_pipe
Image processing pipeline for ECoG data
Language:Jupyter Notebook1 1 0
m9h/infocypher-scieng-deps
Project tracking the fijee build dependencies separately from the main fijee-project. cypher-solid-enigma
1 1 0
m9h/iso2mesh
Iso2Mesh - a 3D surface and volumetric mesh generator for MATLAB/Octave
Language:MATLAB1 1 0
m9h/Jellyfish
A fast multi-threaded k-mer counter
Language:C++1 1 0
m9h/learn.neurotechedu.com
Source code for our open-source EDU website
Language:Jupyter Notebook1 1 0
m9h/meshfix
Meshfix 1.2-alpha by Marco Attene with Linux makefile
Language:C++1 1 0
m9h/mne-biomag-group-demo
Group analysis demo with MNE
Language:Python1 1 0
m9h/mne-cpp
Cross-platform medical (real-time) applications for EEG and MEG data analysis
Language:C++1 1 0
m9h/moabb
Mother of All BCI Benchmarks
Language:Python1 1 0
m9h/neurodocker
Generate custom Docker and Singularity images, and minimize existing containers
Language:Python1 1 0
m9h/nips17-rexgen
Predicting Organic Reaction Outcomes with Weisfeiler-Lehman Network
Language:Python1 1 0
m9h/nistats
Modeling and statistical inference on fMRI data in Python
Language:Python1 1 0
m9h/pymanopt
Python toolbox for optimization on Riemannian manifolds with support for automatic differentiation
Language:Python1 1 0
m9h/simnibs
Simulation of Non-Invasive Brain Stimulation
Language:Python1 1 0
m9h/sodecl
SODECL is a library of ordinary differential equation (ODE) and stochastic differential equation (SDE) solvers in OpenCL.
Language:C++1 1 0
m9h/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
Language:Python1 1 0
m9h/TensorFlow-Examples
TensorFlow Tutorial and Examples for beginners
Language:Jupyter Notebook1 1 01
m9h/unrealcv
UnrealCV: Connecting Computer Vision to Unreal Engine
Language:C++1 1 0
m9h/valis
Shell script to spin up an AWS-hosted JupyterHub kubernetes cluster at valis.center17.net
1 1 0
m9h/FEBio
FEBio Suite Solver