maartenmennes/ICA-AROMA

ICA-AROMA RUNNING IS FINISHED BUT REPORT IMAGE EXCEPTION AFTER FINISHED.

LANchunmei opened this issue · 4 comments

LANchunmei commented

Hello，I was run the ICA-AROMA after preprocession on FSL, and preprocession and ICA-AROMA were installed on the Ubuntu 18.04 LTS in the Windows subsystem for Linux 2.0. ,but after the running finished, there was a report(below part) about can't match the WhiteMask.img in /mnt/e/Templates/WhiteMask_09_91x109x91.img, and I checked the path is right and folder including this files(WhiteMask_09_91x109x91.img), I don't know how to solve this problem, please help me,thank you~

------------------------------- RUNNING ICA-AROMA -------------------------------
--------------- 'ICA-based Automatic Removal Of Motion Artifacts' ----------

Step 1) MELODIC
Step 2) Automatic classification of the components

  • registering the spatial maps to MNI
  • extracting the CSF & Edge fraction features
  • extracting the Maximum RP correlation feature
  • extracting the High-frequency content feature
  • classification
    Found 1 file(s)
    Found 22 head motion-related components in a total of 58 components.
    Step 3) Data denoising ----------------------------------- Finished -----------------------------------

Image Exception : #63 :: No image files match: /mnt/e/Templates/WhiteMask_09_91x109x91.img
Image Exception : #22 :: Failed to read volume /mnt/e/Templates/WhiteMask_09_91x109x91.img
Error : No image files match: /mnt/e/Templates/WhiteMask_09_91x109x91.img
terminate called after throwing an instance of 'std::runtime_error'
what(): Failed to read volume /mnt/e/Templates/WhiteMask_09_91x109x91.img
Error : No image files match: /mnt/e/Templates/WhiteMask_09_91x109x91.img
Aborted (core dumped)
Image Exception : #63 :: No image files match: /mnt/e/Templates/CsfMask_07_91x109x91.img
Image Exception : #22 :: Failed to read volume /mnt/e/Templates/CsfMask_07_91x109x91.img
Error : No image files match: /mnt/e/Templates/CsfMask_07_91x109x91.img
terminate called after throwing an instance of 'std::runtime_error'
what(): Failed to read volume /mnt/e/Templates/CsfMask_07_91x109x91.img
Error : No image files match: /mnt/e/Templates/CsfMask_07_91x109x91.img
Aborted (core dumped)
Image Exception : #63 :: No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/whitemask Image Exception : #22 :: Failed to read volume /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/whitemask
Error : No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/whitemask
terminate called after throwing an instance of 'std::runtime_error'
what(): Failed to read volume /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/whitemask
Error : No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/whitemask
Aborted (core dumped)
Image Exception : #63 :: No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/csfmask
Image Exception : #22 :: Failed to read volume /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/csfmask
Error : No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/csfmask
terminate called after throwing an instance of 'std::runtime_error'
what(): Failed to read volume /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/csfmask
Error : No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/reg/csfmask
Aborted (core dumped)
paste: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/whitets.txt: No such file or directory
matrix multiplication: incompatible matrix dimensions: 0x0 and 250x36234
Image Exception : #63 :: No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/func_data_regressed
terminate called after throwing an instance of 'std::runtime_error'
what(): No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/func_data_regressed Aborted (core dumped)
Image Exception : #63 :: No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/func_data_regressed_filtered
Image Exception : #22 :: Failed to read volume /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/func_data_regressed_filtered
Error : No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/func_data_regressed_filtered terminate called after throwing an instance of 'std::runtime_error'
what(): Failed to read volume /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/func_data_regressed_filtered Error : No image files match: /mnt/l/intranasal/FunImg/101_tangtianlong_d1f/fun.feat/AROMA/func_data_regressed_filtered Aborted (core dumped) ***********finished

maartenmennes commented

it looks like it can't find those file. Perhaps there's an issue with your setup of Linux in a virtual machine, more specifically with accessing files...

LANchunmei commented

it looks like it can't find those file. Perhaps there's an issue with your setup of Linux in a virtual machine, more specifically with accessing files...

Is there any feasible solutions? because I am not good at to solve this kind of issue.

maartenmennes commented

There probably is, but this is beyond my expertise and the help I can provide in the context of ICA-AROMA.

LANchunmei commented

There probably is, but this is beyond my expertise and the help I can provide in the context of ICA-AROMA.
Well, thank you~