maciekboni/PSU-CIDD-Malaria-Simulation

Issues

• Consolidate `days_between_notifications` and `report_frequency` into a single concept

  #74 opened 2 years ago by rjzupkoii
  0

• Upgrade PQXX to newer version

  #73 opened 2 years ago by rjzupkoii
  0

• Merge changes from 4.1.1.1 to main branch

  #71 opened 2 years ago by rjzupkoii
  1

• Update codebase to run on Roar Collab

  #72 opened 2 years ago by rjzupkoii
  0

• Display memory used at end of simulation

  #70 opened 2 years ago by rjzupkoii
  0

• Segmentation dump from ObjectPool when Infant / NonInfantImmune objects are deleted

  #5 opened 5 years ago by rjzupkoii
  1

• Make age dependent biting factor a configurable field

  #7 opened 5 years ago by rjzupkoii
  0

• Create tool chain configuration script

  #13 opened 2 years ago by rjzupkoii
  1

• Clean-Up Deprecated / Removed Configuration Items

  #15 opened 5 years ago by rjzupkoii
  1

• Evaluate / Remove using_free_recombination option

  #18 opened 5 years ago by rjzupkoii
  1

• Evaluate / Remove using_variable_probability_infectious_bites_cause_infection

  #19 opened 5 years ago by rjzupkoii
  1

• Typos in YAML drug_db are difficult to isolate

  #22 opened 4 years ago by rjzupkoii
  0

• Optimize data insertion during simulation execution

  #27 opened 4 years ago by rjzupkoii
  0

• Add configuration options to only record selected genotypes to the database

  #28 opened 4 years ago by rjzupkoii
  0

• Lock the configuration table when r/w access is taking place

  #35 opened 4 years ago by rjzupkoii
  0

• Model unit testing

  #31 opened 4 years ago by rjzupkoii
  1

• Improve error reporting when parsing configuration file

  #32 opened 4 years ago by rjzupkoii
  0

• Make sure CMake sets __DISABLE_CRIT_ERR when not on a Linux operating system

  #36 opened 4 years ago by rjzupkoii
  0

• Update replicate table to include last update timestamp while replicate is running

  #40 opened 4 years ago by rjzupkoii
  0

• Add tracking for immunity and probability of fever

  #53 opened 4 years ago by rjzupkoii
  0

• Review codebase to verify use of C++11 memory management conventions

  #54 opened 4 years ago by rjzupkoii
  0

• Add support for partitioning to large tables

  #55 opened 4 years ago by rjzupkoii
  0

• Better support for clinical trials to calibrate treatments

  #21 opened 5 years ago by rjzupkoii
  1

• Recovery from PQXX timeouts needs to be added

  #24 opened 2 years ago by rjzupkoii
  1

• Simulation crashed due to EIR being infinite

  #26 opened 2 years ago by rjzupkoii
  2

• Configuration fails on ACI with error GLIBC_2.15 not found

  #29 opened 2 years ago by rjzupkoii
  1

• Model configuration file documentation

  #30 opened 4 years ago by rjzupkoii
  0

• Make sure that errors are logged to stderr

  #34 opened 4 years ago by rjzupkoii
  1

• Remove deprecated functions

  #41 opened 4 years ago by rjzupkoii
  0

• Linux out of memory errors killing postgres process when large queries are run

  #38 opened 2 years ago by rjzupkoii
  5

• PQXX out of memory errors

  #39 opened 2 years ago by rjzupkoii
  1

• Don't strip new line characters out of YAML before saving to database

  #56 opened 2 years ago by rjzupkoii
  1

• Associate model version number with replicate in the database

  #69 opened 2 years ago by rjzupkoii
  0

• Update DbReporter reporter to release connections once work is done

  #25 opened 4 years ago by rjzupkoii
  1

• Bus error when running simulation

  #37 opened 4 years ago by rjzupkoii
  1

• Refactor importation events to share a common base class

  #33 opened 4 years ago by rjzupkoii
  0

• Documentation for Strategy Database fields

  #20 opened 5 years ago by rjzupkoii
  0

• Need a way of recovering "hung" jobs from the cluster

  #23 opened 4 years ago by rjzupkoii
  0

• Review approach to configuration

  #12 opened 5 years ago by rjzupkoii
  0

• Allow the seed for the random number generator to be set via CLI or YML file

  #6 opened 5 years ago by rjzupkoii
  0