Bug: Getting requirements to build wheel ... error

[bsunbo]

Hi All, I am having issue with installing MACS3. Really appreciated to have your help. Thanks!

-> pip list
Package Version

---

Cython 0.29.24
pip 23.2.1
setuptools 65.5.0
-> pip install macs3
Collecting macs3
Using cached MACS3-3.0.0b3.tar.gz (648 kB)
Installing build dependencies ... done
Getting requirements to build wheel ... error
error: subprocess-exited-with-error

× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> [33 lines of output]
Traceback (most recent call last):
File "C:\Users\bosun\my_envMACS3\Lib\site-packages\pip_vendor\pyproject_hooks_in_process_in_process.py", line 353, in
main()
File "C:\Users\bosun\my_envMACS3\Lib\site-packages\pip_vendor\pyproject_hooks_in_process_in_process.py", line 335, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\bosun\my_envMACS3\Lib\site-packages\pip_vendor\pyproject_hooks_in_process_in_process.py", line 118, in get_requires_for_build_wheel
return hook(config_settings)
^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\bosun\AppData\Local\Temp\pip-build-env-vs508use\overlay\Lib\site-packages\setuptools\build_meta.py", line 341, in get_requires_for_build_wheel
return self._get_build_requires(config_settings, requirements=['wheel'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\bosun\AppData\Local\Temp\pip-build-env-vs508use\overlay\Lib\site-packages\setuptools\build_meta.py", line 323, in _get_build_requires
self.run_setup()
File "C:\Users\bosun\AppData\Local\Temp\pip-build-env-vs508use\overlay\Lib\site-packages\setuptools\build_meta.py", line 488, in run_setup
self).run_setup(setup_script=setup_script)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\bosun\AppData\Local\Temp\pip-build-env-vs508use\overlay\Lib\site-packages\setuptools\build_meta.py", line 338, in run_setup
exec(code, locals())
File "", line 156, in
File "", line 72, in main
File "C:\Users\bosun\AppData\Local\anaconda3\Lib\subprocess.py", line 466, in check_output
return run(*popenargs, stdout=PIPE, timeout=timeout, check=True,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\bosun\AppData\Local\anaconda3\Lib\subprocess.py", line 548, in run
with Popen(*popenargs, **kwargs) as process:
^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Users\bosun\AppData\Local\anaconda3\Lib\subprocess.py", line 1024, in init
self._execute_child(args, executable, preexec_fn, close_fds,
File "C:\Users\bosun\AppData\Local\anaconda3\Lib\subprocess.py", line 1509, in _execute_child
hp, ht, pid, tid = _winapi.CreateProcess(executable, args,
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
FileNotFoundError: [WinError 2] The system cannot find the file specified
[end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error

× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> See above for output.

Additional context
Add any other context about the problem here.

[philippadoherty]

Hi @bsunbo, can you please provide the following?

• OS: [e.g. Linux, Mac OSX]
• Python version [e.g. 3.7.1]
• Numpy version [e.g. 1.17.0]
  Thanks

[bsunbo]

OS: 64-bit operating system, x64-based processor (Windows 11)
Python version: 3.11.3
Numpy version: 1.25.2

"Package Version

---

cykhash 2.0.1
Cython 0.29.24
hmmlearn 0.3.0
joblib 1.3.1
numpy 1.25.2
pip 23.2.1
scikit-learn 1.3.0
scipy 1.11.1
setuptools 65.5.0
threadpoolctl 3.2.0"

Thank you.

[philippadoherty]

@bsunbo unfortunately Windows OS is not supported, MACS is recommended to be used with either LinuxOS or MacOS.
Another user was able to run Ubuntu in a virtual shell, seen in #540 and install that way.

Thanks.

[bsunbo]

I see. Thank you so much!!