Questions about image cropping

[HelloWorldLTY]

Hi, thanks for your great work. I have a quick question about the image cropping design.

In this function:

 Patches are computed such that:
             - each patch is rescaled to `target_pixel_size` um/px
             - a crop of `target_patch_size`x`target_patch_size` pixels around each ST (pseudo) spot is derived (which coordinates are derived from adata.obsm['spatial'])

You discussed the setting of target_patch_size, does this mean we utilize the center of each spot and 224 as radius to have a square as our final image? Thanks a lot.

[guillaumejaume]

That's almost correct. 224 x 224 px is the final image size at the target px size centered around each spot.

[HelloWorldLTY]

Got it, thanks a lot!