makism/brainnets

Possible to attach an example fMRI code?

wizofe opened this issue · 0 comments

I try to compile this project in order to calculate some graph metrics and get the correlation matrix and adjacency matrix of a resting-state fMRI (4D). I am not sure how to implement though the NIfTI reading, and what input is getting used by brainnets? Is it the raw 4D matrix from NIfTI? E.g. in my case that is a (45,51,45,167) matrix.

Is it possible to attach an example of a use case of reading an input fMRI and calculating some metrics (also pinpointing where the correlation matrix/adjacency matrix are saved?)

Have you tried a multithreading approach as well?

Thank you for your time.