/kalign-dunovo

An adaptation of the Kalign multiple sequence aligner for use in the Du Novo pipeline.

Primary LanguageCGNU General Public License v2.0GPL-2.0

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  Kalign version 2.03, Copyright (C) 2006 Timo Lassmann

  http://msa.cgb.ki.se/
  timolassmann@gmail.com

	This program is free software; you can redistribute it and/or modify
	it under the terms of the GNU General Public License as published by
	the Free Software Foundation; either version 2 of the License, or
	any later version.

	This program is distributed in the hope that it will be useful,
	but WITHOUT ANY WARRANTY; without even the implied warranty of
	MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
	GNU General Public License for more details.

	You should have received a copy of the GNU General Public License
	along with this program; if not, write to the Free Software
	Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
  
	A copy of this license is in the COPYING file.
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This is a modified version of the Kalign2 code written by Timo Lassmann. It has been modified to
integrate it with Du Novo. It will not function independently.

Installation:

% make clean
% make