makovalab-psu

Pinned Repositories

cluster-monitor
View the status of the slurm cluster via a web interface.
Language:JavaScript3 5 00
DiscoverY
K-mer based classifier for Y-contig identification from Whole Genome Assemblies
Language:Jupyter Notebook11 6 125
great-ape-Y-evolution
Language:Python2 10 05
L1_Project
Language:Jupyter Notebook1 6 02
mafft-dunovo
An adaptation of the MAFFT multiple sequence aligner for use in the Du Novo pipeline.
Language:C1 4 00
Mito_nuclear_incompatibility
Repository containing data files and scripts for the mito-nuclear paper
Language:q4 4 02
NoiseCancellingRepeatFinder
Noise-Cancelling Repeat Finder
Language:Python24 7 104
overlaps
Language:Jupyter Notebook5 5 00
RecoverY
K-mer based read classification for Y-chromosome specific sequencing and assembly
Language:Python9 4 25
T2T_primate_XY
Language:Python12 6 10

makovalab-psu's Repositories

makovalab-psu/Mito_nuclear_incompatibility
Repository containing data files and scripts for the mito-nuclear paper
Language:q4 4 02
makovalab-psu/GorillaY_project
Language:Python11
makovalab-psu/mafft-dunovo
An adaptation of the MAFFT multiple sequence aligner for use in the Du Novo pipeline.
Language:C1 4 00
makovalab-psu/Ampliconic_CNV
Language:R1
makovalab-psu/biomonika
Language:C#
makovalab-psu/miscellaneous
Language:Shell
makovalab-psu/nonBKinetics
Language:R6 21
makovalab-psu/RegVar
Regional variation project scripts
Language:Python
makovalab-psu/tools-blankenberg
Contains a set of Galaxy Tools mostly written by Daniel Blankenberg (most tools are to be migrated to tool-iuc: https://github.com/galaxyproject/tools-iuc)