mani2012

2015-05-12-BUSM-git

2015-05-12-BUSM-git

BatchQC

Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.

example_swcarpentry_git

Example practice git repository

PathoStat

The purpose of this package is to perform Statistical Analysis on the PathoScope generated reports files.

PipelineBuild

Generates commands for analyzing all the files in the given directory

SplitQsub

Python program that given a set of commands in one file, will split it in to multiple qsub files, which can then be submitted to run all parallel at once

PathoScope

Pathoscope: Species identification and strain attribution with unassembled sequencing data

mani2012/BatchQC

Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.

mani2012/PathoStat

The purpose of this package is to perform Statistical Analysis on the PathoScope generated reports files.

mani2012/2015-05-12-BUSM-git

mani2012/example_swcarpentry_git

Example practice git repository

mani2012/PipelineBuild

Generates commands for analyzing all the files in the given directory

mani2012/SplitQsub

Python program that given a set of commands in one file, will split it in to multiple qsub files, which can then be submitted to run all parallel at once