Including combat_seq

Question

Including combat_seq

cmatKhan opened this issue 3 years ago · 3 comments

cmatKhan commented 3 years ago

Are there any plans to include combat_seq in BatchQC?

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7518324/

Answer 1 · 2023-05-24T13:57:32.000Z

Same question from me, it would be great if the BatchQC could integrate combat-seq

Answer 2 · 2023-05-24T14:22:19.000Z

Yes! Hopefully very soon! On May 24, 2023, at 7:57 AM, WangKang-Leo ***@***.***> wrote: Same question from me, it would be great if the BatchQC could integrate combat-seq —Reply to this email directly, view it on GitHub, or unsubscribe.You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

Answer 3 · 2023-05-29T15:35:56.000Z

Yes! Hopefully very soon! On May 24, 2023, at 7:57 AM, WangKang-Leo @.> wrote: Same question from me, it would be great if the BatchQC could integrate combat-seq —Reply to this email directly, view it on GitHub, or unsubscribe.You are receiving this because you are subscribed to this thread.Message ID: @.>

I am just wondering whether we could use count data (from RNA-seq) as input? Because combat wrapped in batchQC only receive normalized data matrix......