/npg_qc

QC checks and metrics for Illumina NGS data

Primary LanguagePerl

QC Checks and Metrics for Illumina Next Generation Sequencing Data
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lib directory:
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 npg_qc::Schema namespace - DBIx db binding
 npg_qc::illumina - db loaders for Illumina QC metrics
 npg_qc::autoqc namespace - WTSI core sequencing pipeline inhouse
     QC checks and storage of QC results

bin directory:
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 perl scripts

scripts directory:
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 supplimentary scripts

src directory:
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 source code for C utilities

t directory:
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 tests
 test data
 supplimentary scripts and modules for testing