Pinned Repositories
aws-genomics-workflows
Genomics Workflows on AWS
bulbusRNAseq
bulkToSingleRNAseq
mapping zebrafish bulk RNA-seq data onto human scRNA-seq
chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
EnhancedVolcano
Publication-ready volcano plots with enhanced colouring and labeling
mpawlak
mummer
Mummer alignment tool
normalizeGeneCounts
Takes raw counts and normalize to CPM, RPKM or TPM
RNAseqForBiologists2018
RNA Club meets NGSchool: Tutorial of RNA-seq Data Analysis for Biologists
zebraCardioSOM
self-organising map of RNA-seq data from developing zebrafish cardiomyocytes
mapawlak's Repositories
mapawlak/normalizeGeneCounts
Takes raw counts and normalize to CPM, RPKM or TPM
mapawlak/aws-genomics-workflows
Genomics Workflows on AWS
mapawlak/bulbusRNAseq
mapawlak/bulkToSingleRNAseq
mapping zebrafish bulk RNA-seq data onto human scRNA-seq
mapawlak/chipseq
ChIP-seq peak-calling, QC and differential analysis pipeline.
mapawlak/EnhancedVolcano
Publication-ready volcano plots with enhanced colouring and labeling
mapawlak/mpawlak
mapawlak/mummer
Mummer alignment tool
mapawlak/RNAseqForBiologists2018
RNA Club meets NGSchool: Tutorial of RNA-seq Data Analysis for Biologists
mapawlak/zebraCardioSOM
self-organising map of RNA-seq data from developing zebrafish cardiomyocytes
mapawlak/PAIRADISE
Paired Replicate Analysis of Allelic Differential Splicing Events
mapawlak/rhino-masterclass
mapawlak/rmats-turbo
mapawlak/rna_atac_integration_cardio
Development of methods to integrate RNA-seq and ATAC-seq
mapawlak/rocker
R configurations for Docker
mapawlak/scRNAseq
Seurat tutorial and custom solutions
mapawlak/shiitake
shiitake mini-project
mapawlak/shiny_debug
mapawlak/shinyconf2024-shiny101
Shiny 101: Modular App Blueprint workshop ✨
mapawlak/single-cell_sib_scilifelab
SIB/Scilifelab autumn school in single cell omics 2019.