mararie

Group Leader in Computational Biology and Systems Medicine at the Centre for Molecular Medicine Norway (NCMM), University of Oslo

NCMMOslo, Norway

Pinned Repositories

GTEx
Regulatory networks for 38 GTEx tissues
0 1 00
LIONESS_StarProtocols
Code to support the LIONESS STAR Protocol
Language:MATLAB0 1 01
lionessR
Single sample network reconstruction in R
Language:R21 1 16
long-haul
A minimal, type-focused Jekyll theme.
Language:CSS0 1 00
netbooks
Notebooks for network medicine.
Language:Jupyter Notebook0 0 00
PUMA
PUMA: PANDA Using MicroRNA Associations
Language:C0 2 03
pypanda
Python implementation of PANDA (Passing Attributes between Networks for Data Assimilation)
Language:Python0 1 00
pypanda-1
Python implementation of PANDA and LIONESS
Language:Python0 1 00
SAMBAR
R package SAMBAR
Language:R4 1 02
thesis
PhD thesis LaTeX files
Language:TeX1 2 00

mararie's Repositories

mararie/lionessR
Single sample network reconstruction in R
Language:R21 1 16
mararie/SAMBAR
R package SAMBAR
Language:R4 1 02
mararie/thesis
PhD thesis LaTeX files
Language:TeX1 2 00
mararie/GTEx
Regulatory networks for 38 GTEx tissues
0 1 00
mararie/LIONESS_StarProtocols
Code to support the LIONESS STAR Protocol
Language:MATLAB0 1 01
mararie/long-haul
A minimal, type-focused Jekyll theme.
Language:CSS0 1 00
mararie/netbooks
Notebooks for network medicine.
Language:Jupyter Notebook0 0 00
mararie/PUMA
PUMA: PANDA Using MicroRNA Associations
Language:C0 2 03
mararie/pypanda
Python implementation of PANDA (Passing Attributes between Networks for Data Assimilation)
Language:Python0 1 00
mararie/pypanda-1
Python implementation of PANDA and LIONESS
Language:Python0 1 00
mararie/pypuma
PUMA (https://github.com/mararie/PUMA) for Python
Language:Python1 0
mararie/random
Some general scripts
Language:Shell1 0